XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCG
CAGAAGATGGAACAGAAAAAGGCCTTCTAGATATAATGGAGGCAGTACTC
ATATGAACTCAGACTGTGACAGCACGCACTGGTCCTACACAGGTCTAGGC
CAGATGAGATCCTAATACTAGAGAGGAAATGGACAAAAACCCTCCTCTCT
AAGTCAGAAGCTACCTGCAGTTGGTAACCACTCACAAACAAAACAAATTA
GTTTTCTCCAATGGAGTCTTACTGGGTATATAAACCACACTTAAGGGCAG
GCCTGAGGCCTGCAGTAGATGGCCAACACACAAAAACTGAGTGATAATTT
TGGAGTGATTGTTTTCTTTGTTTGCTTGCTTTGCCTGAGGAATATTTTGT
GTTGCGTCCCCCCCCTAAAACATTATAGGCCCTCTGCACATACCTTATGG
CCCATTTGGCTTCCCTCCTTGTTTCACCCTTCCCCCCCCTCTTTTCTCTC
CATTTTCCCCCCTCTTTCCCCATCCCCCCCCCTTTCCCCCCCGCTATCCT
CCTCCCTATTCCCCCCTCTCTTTTTCCCTTTTTCTCCCTCCCCCCCTCTC
GTCCTCTACCTTCCCTTACCCCCCCACTCCACCCCCCCTTTCTTTCCCCT
CTCTCTCTTCCCCCACCCTCTCCCCCTCCATACTATAATTTTTCTCCAAC
ATCGCTATCCCATCCCGCTACCCCACGTTTCTCCCTCTCTTCCGCTCACT
CCCCCCGCCCN

GCTTCCTCTCCGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCTCTCCACCTGAATTCG
CCCTAAAGGTAAGAACAAGAAAACATCAGAGCAGAGGAGTAACATTCAAC
AGACAACTGAAGATTTTCTTCTGTAAATAAATAAATTACCCATACACACA
AATAAATAAATAAATAAATTACCCATACACACAAATAAATAAATAAATAA
ATTACCCATACACACAAATAAATAAATAAATAAATTACCCATACACACAA
ATAAATAAATAAATAAATTACCCATTCATGACCAAGTTGGTGTAAACAAG
GCCACAGGAAGTTTTCTATGGCTTAAAGACATCCGCCCACAAGTATGAAA
AGGAGTGCCTGAGAGGAACTCACAAAGCTCTGGACCGTCAAATCCCAGCC
CCTTATGCATCAGACCCACGTGATCTGTGCAAGTTTCTCTCTCTTGATGA
CTGTGAAGGCGGACCAGGATGACAGCAGCAGAGCCTGTGGCATTAACTTA
GCTCTTTGTGGTTTCTCTTTAACCTTCCTCCTGGGCACCCAGGAATCTGG
CCAGAGTGGACATAGTGTCAAAGAACTGGCATGTTGCTCTCTGCATTATG
TCATGGTCATCTCAACCCAAGGAGACAGGAAACTGTTGTTTGTAGGAGAC
CATAG

Query= MSMg01no115_j08.g1 MSMg01no115_j08.g1 CHROMAT_FILE:
MSMg01no115_j08.g1 PHD_FILE: MSMg01no115_j08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:34 2005
         (524 letters)



>mm_chr8_81570300_81571224
          Length = 925

 Score =  793 bits (410), Expect = 0.0
 Identities = 457/488 (93%), Gaps = 29/488 (5%)
 Strand = Plus / Minus

                                                                       
Query: 61  cattcaacagacaactgaagattttcttctgtaaataaataaattacccatacacacaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 925 cattcaacagacaactgaagattttcttctgtaaataaataaattacccatacacacaaa 866

                                                                       
Query: 121 taaataaataaataaattacccatacacacaaataaataaataaataaattacccataca 180
           |||||||||||||||||||||||||||||||||||||||||||||||     ||||||||
Sbjct: 865 taaataaataaataaattacccatacacacaaataaataaataaata----gcccataca 810

                                                                       
Query: 181 cacaaataaataaataaataaattacccatacacac------------aaataaataaat 228
           ||||||||||||||||||||||||||||||||||||            ||||||||||||
Sbjct: 809 cacaaataaataaataaataaattacccatacacacaaataaataaataaataaataaat 750

                                                                       
Query: 229 aaataaattaccca----------ttcatgaccaagttggtgtaaacaaggccacaggaa 278
           ||||||||||||||          ||||||||||||||||||||||||||||||||||||
Sbjct: 749 aaataaattacccatacacacaacttcatgaccaagttggtgtaaacaaggccacaggaa 690

                                                                       
Query: 279 gttttctatggc-ttaaagacatccgcccacaagtatgaaaaggagtgcctgagaggaac 337
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 gttttctatggctttaaagacatccgcccacaagtatgaaaaggagtgcctgagaggaac 630

                                                                       
Query: 338 tcacaaagctctggaccgtcaaatcccagccccttatgcatcagacccacgtgatctgtg 397
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 tcacaaagctctggaccgtcaaatcccagccccttatgcatcagacccacgtgatctgtg 570

                                                                       
Query: 398 caagtttctctctcttgatgactgtgaaggcggaccagga-tgacagcagcagagcctgt 456
           ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 569 caagtttctctctcttgatgactgtgaaggcggacca-gattgacagcagcagagcctgt 511

                                                                       
Query: 457 ggcattaacttagctctttgtggtttctctttaaccttcctcctgggcacccaggaatct 516
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ggcattaacatagctctttgtggtttctctttaaccttcctcctgggcacccaggaatct 451

                   
Query: 517 ggccagag 524
           ||||||||
Sbjct: 450 ggccagag 443


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 92
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 925
Length adjustment: 10
Effective length of query: 514
Effective length of database: 915
Effective search space:   470310
Effective search space used:   470310
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)