Query= MSMg01no116_f01.b1 MSMg01no116_f01.b1 CHROMAT_FILE:
MSMg01no116_f01.b1 PHD_FILE: MSMg01no116_f01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:32 2005
(568 letters)
>mm_chr8_71556129_71557095
Length = 967
Score = 588 bits (304), Expect = e-172
Identities = 313/316 (99%), Gaps = 1/316 (0%)
Strand = Plus / Minus
Query: 1 gcgttgttactgtgggggtggtcgacagctccgtgcaagtattttcctcagaagaacttc 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 315 gcgttgttactgtgggggtggt-gacagctccgtgcaagtattttcctcagaagaacttc 257
Query: 61 cagagaaaaaggtagaagacagtgatcctgaccttgtacaggtctggttatatatgtgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 cagagaaaaaggtagaagacagtgatcctgaccttgtacaggtctggttatatatgtgta 197
Query: 121 ttagtcagggttctctagagtcacagaacttatggacagtctctagatagtaaaggaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 ttagtcagggttctctagagtcacagaacttatggacagtctctagatagtaaaggaatt 137
Query: 181 tattgatgacttacagtcggcggcccaattcccaacaattgttcagtcgcagctgtgaat 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 136 tattgatgacttacagtcggcagcccaattcccaacaattgttcagtcgcagctgtgaat 77
Query: 241 ggaagtccaaggatctagcagttactcagtctcacccagcaagcaggcgaaggaacaaga 300
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 76 ggaagtccaaggatctagcagttactcagtctcacgcagcaagcaggcgaaggaacaaga 17
Query: 301 gctagactcccttctt 316
||||||||||||||||
Sbjct: 16 gctagactcccttctt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 967
Length adjustment: 10
Effective length of query: 558
Effective length of database: 957
Effective search space: 534006
Effective search space used: 534006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no116_f01.g1 MSMg01no116_f01.g1 CHROMAT_FILE:
MSMg01no116_f01.g1 PHD_FILE: MSMg01no116_f01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:32 2005
(289 letters)
>mm_chr8_71407941_71408629
Length = 689
Score = 559 bits (289), Expect = e-164
Identities = 289/289 (100%)
Strand = Plus / Plus
Query: 1 ctgtctctcctcatccagcagtgagcccagtacacatgctggatgtatggcatccaacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgtctctcctcatccagcagtgagcccagtacacatgctggatgtatggcatccaacct 260
Query: 61 gagccctggatatggatctccacattaaactggattttttttttctcatggaaacataca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagccctggatatggatctccacattaaactggattttttttttctcatggaaacataca 320
Query: 121 aagtcagcctgaataatttcagagactacccatggccatttcaaagtcagcagggccact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagtcagcctgaataatttcagagactacccatggccatttcaaagtcagcagggccact 380
Query: 181 aacttacccaattctagggtaaaggtgaccacacaagagagtgacatttctggagctgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacttacccaattctagggtaaaggtgaccacacaagagagtgacatttctggagctgtt 440
Query: 241 gaaggtaatcttatgacgcagcaatgcaaaaaaaaaaaaaaaaaaaaaa 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaggtaatcttatgacgcagcaatgcaaaaaaaaaaaaaaaaaaaaaa 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
