Query= MSMg01no116_k06.b1 MSMg01no116_k06.b1 CHROMAT_FILE:
MSMg01no116_k06.b1 PHD_FILE: MSMg01no116_k06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:57 2005
(492 letters)
>mm_chr8_72988334_72989225
Length = 892
Score = 930 bits (481), Expect = 0.0
Identities = 487/489 (99%)
Strand = Plus / Plus
Query: 4 gaattccttaccaattcgcgcacttgctccccaacaaaagggcaagacagcactgagata 63
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattccttaccaattcgagcacttgctccccaacaaaagggcaagacagcactgagata 263
Query: 64 cagctgggaggatccaggctccagggctggatccagtccccaaagcccagctgagttgga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cagctgggaggatccaggctccagggctggatccagtccccaaagcccagctgagttgga 323
Query: 124 gtatggagctcaggagccggagggggcaaaacgtccaaactttatcccagaggatgccac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gtatggagctcaggagccggagggggcaaaacgtccaaactttatcccagaggatgccac 383
Query: 184 taggcaccccattgccttcatgaggtatggaggtccctgaagatgagggaagggcttggc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 taggcaccccattgccttcatgaggtatggaggtccctgaagatgagggaagggcttggc 443
Query: 244 tgccaggtccctgcctggctccattccttgctgcctattccatttagaacttcattcttc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgccaggtccctgcctggctccattccttgctgcctattccatttagaacttcattcttc 503
Query: 304 tgctcttagtccacctccccatggctgaaataggagctctgggaggccagccagaagggt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgctcttagtccacctccccatggctgaaataggagctctgggaggccagccagaagggt 563
Query: 364 tctttctcctgccacatcctgatgtccacccctccacccccacagtgaaggagccttgtc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tctttctcctgccacatcctgatgtccacccctccacccccacagtgaaggagccttgtc 623
Query: 424 acattagtgacctggacagttggcgacaaggtagatgagtgggagggatgggtggagaga 483
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 624 acattagtgacctggacagttggtgacaaggtagatgagtgggagggatgggtggagaga 683
Query: 484 cggataaga 492
|||||||||
Sbjct: 684 cggataaga 692
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 892
Length adjustment: 10
Effective length of query: 482
Effective length of database: 882
Effective search space: 425124
Effective search space used: 425124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no116_k06.g1 MSMg01no116_k06.g1 CHROMAT_FILE:
MSMg01no116_k06.g1 PHD_FILE: MSMg01no116_k06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:57 2005
(516 letters)
>mm_chr8_73132015_73132930
Length = 916
Score = 971 bits (502), Expect = 0.0
Identities = 511/514 (99%), Gaps = 3/514 (0%)
Strand = Plus / Minus
Query: 5 agatcctcctgcctctgtctaccgcgttaagaaa-actttcagaaaaacaaa-aaaacgt 62
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 916 agatcctcctgcctctgtctaccgcgttaagaaacactttcagaaaaacaaacaaaacgt 857
Query: 63 gcttggtctggggttcagtccttacaacgctggcatgcataaaaaaaaaaacaaaaaaaa 122
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 856 gcttggtctggggttcagtccttacaacgctggcatgcataaaaaaaaaaac-aaaaaaa 798
Query: 123 aaaaaaccgggctctgtgcacagcacacagaccaggctaagtggcacacgcctgtcgtgc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 aaaaaaccgggctctgtgcacagcacacagaccaggctaagtggcacacgcctgtcgtgc 738
Query: 183 aaacgctagggaggctgaggcaggaggattagaatttcagggttatctgttttatgtgtt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 aaacgctagggaggctgaggcaggaggattagaatttcagggttatctgttttatgtgtt 678
Query: 243 tgagacaagcctggcctatatgaaactctctcaaaagggcccctcacagcccgcagcgct 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tgagacaagcctggcctatatgaaactctctcaaaagggcccctcacagcccgcagcgct 618
Query: 303 gtattggctcgcagagagtgtcctgggagtagaatgtcatgggcgcatatcctgtgagcc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gtattggctcgcagagagtgtcctgggagtagaatgtcatgggcgcatatcctgtgagcc 558
Query: 363 caagagcctagtgcagttcctgagtcgaaacggagatatccacagcaccccacccccacc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 caagagcctagtgcagttcctgagtcgaaacggagatatccacagcaccccacccccacc 498
Query: 423 cccagatctgtacaactgggagtcttgctccgcagccgaggtatgcttggagctcgcggc 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 cccagatctgtacaactgggagtcttgctccgcagccgaggtatgcttggagctcgcggc 438
Query: 483 catccccctgcctcagcttcccaattgcacaaat 516
||||||||||||||||||||||||||||||||||
Sbjct: 437 catccccctgcctcagcttcccaattgcacaaat 404
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 916
Length adjustment: 10
Effective length of query: 506
Effective length of database: 906
Effective search space: 458436
Effective search space used: 458436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
