Query= MSMg01no117_e20.b1 MSMg01no117_e20.b1 CHROMAT_FILE:
MSMg01no117_e20.b1 PHD_FILE: MSMg01no117_e20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:48 2005
(649 letters)
>mm_chr8_84324002_84325050
Length = 1049
Score = 1054 bits (545), Expect = 0.0
Identities = 545/545 (100%)
Strand = Plus / Minus
Query: 101 actgatattatagcttcaatagtccttctgacattacttcaagaaacagtaaagaacaat 160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1049 actgatattatagcttcaatagtccttctgacattacttcaagaaacagtaaagaacaat 990
Query: 161 ggttaaaaaataggttttggagcaaggcttcaagggaaaccttgactcataaaaattagt 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 989 ggttaaaaaataggttttggagcaaggcttcaagggaaaccttgactcataaaaattagt 930
Query: 221 catgcaacattagcttctcactgaatggtaccatgctcaggtttctcttttgtcaagtag 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 929 catgcaacattagcttctcactgaatggtaccatgctcaggtttctcttttgtcaagtag 870
Query: 281 ggaactatgatcacagtacctcccctcacactgtcatcatggatatggcaagaaaaatag 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 869 ggaactatgatcacagtacctcccctcacactgtcatcatggatatggcaagaaaaatag 810
Query: 341 ggatgtatgattgtgagctaagcacttggcaaaggatcatatacattactgataacccca 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 ggatgtatgattgtgagctaagcacttggcaaaggatcatatacattactgataacccca 750
Query: 401 gctcatactggaatcagaactggtaagccagttcccaccaacctcacatgtctgaatttt 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 gctcatactggaatcagaactggtaagccagttcccaccaacctcacatgtctgaatttt 690
Query: 461 gtgttgtctggaattcctcccagtttcaggagtcaaactcctttgctttgtctttaccat 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 gtgttgtctggaattcctcccagtttcaggagtcaaactcctttgctttgtctttaccat 630
Query: 521 aaatatctgttctgagggaaaaacaaaactcttaaacctttgaccggaaaaatgtacaaa 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 aaatatctgttctgagggaaaaacaaaactcttaaacctttgaccggaaaaatgtacaaa 570
Query: 581 ttccatatagctcaaaaaagatattaaattgcttttatgtccattgctgtcactatcaac 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 ttccatatagctcaaaaaagatattaaattgcttttatgtccattgctgtcactatcaac 510
Query: 641 aaatt 645
|||||
Sbjct: 509 aaatt 505
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space: 663921
Effective search space used: 663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no117_e20.g1 MSMg01no117_e20.g1 CHROMAT_FILE:
MSMg01no117_e20.g1 PHD_FILE: MSMg01no117_e20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:49 2005
(562 letters)
>mm_chr8_84189439_84190401
Length = 963
Score = 1065 bits (551), Expect = 0.0
Identities = 560/563 (99%), Gaps = 1/563 (0%)
Strand = Plus / Plus
Query: 1 ctttaggt-ccatgtttcaaatgtgcttattgcacagaatgggagaagccgaaatgaatc 59
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctttaggaaccatgtttcaaatgtgcttattgcacagaatgggagaagccgaaatgaatc 260
Query: 60 tttgacttggaacaatgcctgttcttgagaaatattatctaattaagcaattttccaata 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttgacttggaacaatgcctgttcttgagaaatattatctaattaagcaattttccaata 320
Query: 120 aagtaggcatttaaattttcacagaaaccaggaacccgccaaaatggtgtttaaaactgg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagtaggcatttaaattttcacagaaaccaggaacccgccaaaatggtgtttaaaactgg 380
Query: 180 caatggtaaatcactttacagtttaccaaaggcctttattttactggcttgatgattttc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caatggtaaatcactttacagtttaccaaaggcctttattttactggcttgatgattttc 440
Query: 240 aaactggttttagtcatagaacattacatgtgtatatatgttcaatgcttttgctaattg 299
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaactggttttagtcacagaacattacatgtgtatatatgttcaatgcttttgctaattg 500
Query: 300 tatacgtacataatgcaagtaaggagctttctctctaagttcattcagttagccctcttt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatacgtacataatgcaagtaaggagctttctctctaagttcattcagttagccctcttt 560
Query: 360 ctctcccttatctgactttcgaacagtggtcctgagagtcttagggtaaaaattgctctc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctctcccttatctgactttcgaacagtggtcctgagagtcttagggtaaaaattgctctc 620
Query: 420 cgaattctgtctcttccttgagtgtaggcacagacatcccattgcctttttggatttgtt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cgaattctgtctcttccttgagtgtaggcacagacatcccattgcctttttggatttgtt 680
Query: 480 tttcaaatgtagagtggacttctaggctgtcttctgtaatgtggaggaagtcatctaatg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tttcaaatgtagagtggacttctaggctgtcttctgtaatgtggaggaagtcatctaatg 740
Query: 540 catggcgaacattaaggcacatc 562
|||||||||||||||||||||||
Sbjct: 741 catggcgaacattaaggcacatc 763
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 562
Length of database: 963
Length adjustment: 10
Effective length of query: 552
Effective length of database: 953
Effective search space: 526056
Effective search space used: 526056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
