CXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAAATCCGCGGAATTC
ATTGAAATCTGCAGAATGGAAATATTCAGAAAGACACATTTTTTAAAGTT
ATAAAAAGTCCATTAATTTTAACAACATATTTTATCACATAGTCATATCC
CCATCAGATAATTACAGCATTTACCCAGTGTATAAACTATCTTATTTTAC
CTCTACTTTGTTTTAATGTTCTGTTTTAGGCTCAGTGTATATTTCATACT
TAAGTCACAGTTGAGAGCAGCCATACTTTTACTAGCTAAGTAGCCACAAG
TAGACAAGGAAGAATAATCAGAAGACCATAAACCTTTTCATAGAGGAGGG
TGATCAAAGACTTTCTGGTGATAACAATCCTCTGAGTGAAGAACTAGTGA
ATTAAGACTGCTGTCGTTAGTTAGTTAGTTAGTTAGTTAGACAACTATTT
ATTTGGGAAAACATTCAGATGGCCTTTGAAATCAGCAGATCCTAAAGGAG
ACACTGGGAAGGTAGATGGAGGGAAAGATGCTCATGTTCTTAGCCTCAGT
AGAAGGGCTGGATTGGGAACAAGATCTATCTTTTAAAAACTTTGAATGTG
TGAAATCACTGAAAGTCCCAAAATTCTTCCACTAGTAGAATGAATAAGTG
AAACCATGATGAAATGAAACCATGTCTGCTTCAGGTTGGGAGATTATGCT
AC

NCCGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXATGTGCTTGAGGCTCCTGGTGACAT
TGAGCCAATTCATTCCACTTGTGCTGCTGACCGCAGGGCTCCTGCTGATG
CTGAGCCAAATTTTACCACCTGTGCTGCTGTCAATGGGGCTCCTGCTGAT
GTTGAGCCATCTACTTCACAACTTGTTCCTGACAGTGGTGCTCCTGGTGA
TGTTGAGCCAACTACTTCCCAGTGTGCTCCTGACTGTGAGGATCCTGCAG
TCATTGAGCCAACTCATTCCACCTGTGCTGCTGACAGCAGGGCTCTTGCT
GATGCTGAGCCAAATTCTTCCACCTGTGCTGCTGTCAATGGGGCTCCTGC
TGATGATGAGCCAACTACTTCTTCCCAGTGTGCTCCTGACTGTGAGGATC
CTGCAGTCATTGAGCCAACTCATTCCACCTGTGCTGCTGACAGCAGGGCT
CCTGCTGATGCTGAGCCAAATTCTTCCACCTGTGCTGCTGTCAATGGGGC
TTCTGCTGATGTTGAGCCAACTACTTCTTCCCAGTGTGCTCCTGACTGTG
AGGATCCTGCAGTCATTGAGCCAACTCATTCCACCTGTGCTGCTGACAGC
AGGGCTCCTGCTGATGCTGAGCCAATTTCTTCCACCTGAGCTGTTGTCAA

Query= MSMg01no117_h24.b1 MSMg01no117_h24.b1 CHROMAT_FILE:
MSMg01no117_h24.b1 PHD_FILE: MSMg01no117_h24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:04 2005
         (558 letters)



>mm_chr8_105211675_105212633
          Length = 959

 Score =  855 bits (442), Expect = 0.0
 Identities = 535/576 (92%), Gaps = 18/576 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaatattcagaaagacacattttttaaagttataaaaagtccattaattttaacaacata 60
           |||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||
Sbjct: 184 aaatattcagaaagacacatttttaaaagttataaaaagtccattaattttaaccatata 243

                                                                       
Query: 61  ttttatcacatagtcatatccccatcagataattacagcatttacccagtgtataaacta 120
           |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 244 ttttatcacatagtcatatccccatcagataattacagcatttacccagtatataagcta 303

                                                                       
Query: 121 tcttattttacctctactttgttttaatgttctgttttaggctcagtgtatatttcatac 180
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tcttattttacttctactttgttttaatgttctgttttaggctcagtgtatatttcatac 363

                                                                       
Query: 181 ttaagtcacagttgagagcagccatacttttactagctaagtagccacaagtagacaagg 240
           | ||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||
Sbjct: 364 tgaagtcacagttgagagcagccatacttttacaagctaagtagccacaagtagtcaggg 423

                                                                       
Query: 241 aagaataatcagaagaccataaaccttttcatagaggagggtgatcaaagactttctggt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 aagaataatcagaagaccataaaccttttcatagaggagggtgatcaaagactttctggt 483

                                                                       
Query: 301 gataacaatcctctgagtga-agaactagtgaattaagactgctgtc------------- 346
           |||| ||||||||||||| | ||||||| |||| |||||||||||||             
Sbjct: 484 gatagcaatcctctgagttagagaactaatgaaataagactgctgtccttagttagttag 543

                                                                       
Query: 347 ---gttagttagttagttagttagttagacaactatttatttgggaaaacattcagatgg 403
              |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 544 ttagttagttagttagttagttagttagacaactatttatttgagaaaacattcagatgg 603

                                                                       
Query: 404 cctt-tgaaatcagcagatcctaaaggagacactgggaaggtagatggagggaaagatgc 462
           |||| |||| |||||||| || ||||||||||||||||| ||||||||||||||||||||
Sbjct: 604 ccttctgaactcagcagacccaaaaggagacactgggaaagtagatggagggaaagatgc 663

                                                                       
Query: 463 tcatgttcttagcctcagtagaagggctggattgggaacaagatctatcttttaaaaact 522
           |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 664 tcatgtccttagcctcagtagaagggctggattgggaacaagatctatgttttaaaaact 723

                                               
Query: 523 ttgaatgtgtgaaatcactgaaagtcccaaaattct 558
           |||||||||||||||||| |||||||||| ||||||
Sbjct: 724 ttgaatgtgtgaaatcacagaaagtcccagaattct 759


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 959
Length adjustment: 10
Effective length of query: 548
Effective length of database: 949
Effective search space:   520052
Effective search space used:   520052
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)