ACTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCAGCAGCTTCGCCCATGCTGGCTTTGGCTTTAGAGAAANAATAGA
AGGGACTACTAGGACAATTGATACTGGTTAGCTGGAGCTGAGAAATTAGC
AGTCATCGAGACCAGCATTACTGAGGTGAAATCTGGGATGTGTTTTCTGA
GAGCACAAAGAAGCTATGTTCCAGAGATGGCCAAGGTTGTACCTCATGCT
GCAGCTGGACTTGGTAATGTGTAAGAGTCACCCAGGTGGTACTGGTTTTG
AAGGCATGAAGGGGTCATGAAGATCAGCTGAAGCTCTGCACTGTGAGAGG
CCATGAAAGGCCATTGGTGAAGGCACAGCCTCAGTTATAGCCTCCCCTCC
TGAGGGTTCCCTTGGCCCCTTCATATGTAAAAATAAAAAACTCAAGATAG
CTAAAACAATCCTGTAAAATAAAAACCACTGGAGGCATCACCATCCCTGA
TTTCAAACTATACTACAAAGCTATAGTAATAAAAACTGCATGGTATTGGT
GTAAAGACAGACAGACAGGTTGATCAATAGAATAGAATTGAAGATGCAGA
TATAAATCCACACACCTATGGACACCTGATTTTGGATAAAGAAGTCAGAC
ATATACAATGTGAAAAAAAGCACCTTTGACAAATGATGCTGGTCTACTTG
GATGTCAGCACCAAAAAAA

AATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTATCATGATAGGTTGGCACAGAGGATTTA
GTGGTCTCTAGAGAGATGCTACATCACTGTAGGGATACAGAGAGCAGGAG
ACCACTCTCCTCATAGCCAAGAATGGAAGAGGGAGGAAGAGACTGGTATC
CTAGTGTCCCCTTTCTGGGCATGCTCCCAGTGACCTGATGATGCTCTGTC
TGGCTCCACCTTTTACCACATTCAACTTCTTTCAAGAACCACAAGCTGGG
CACCAATCCTAATACACAGGTCTTTGGGAAGTGTTCAAAATACGGACGCT
ATCAAGCACTGTCTAGCTGTGGCATATTGGTGAAGTCTCACTATTGGGAA
TCTGTTTCTCCACAGAGATGCTCCTGGAGATCCTGATATTTACCAAGCCT
TTAAGTACACTGTAATGGGAAGTAATGAAAACTCTGGGATTAGGTTATCT
CTAAGATTTCTGCCTGTTATAGCTTCCTGTGTTTCTGTGGAAAATATTTC
AATCCCTGACCCCCAAGAATAAAGTTGGTGCTGGGAAGGAAATGAGCAAA
GGGATCTTGTTATCTTTGACACATGGTGATTATGTTCCCTTGTCCAAAAG
TTATGAATTTTCCCAGGACAGCACGGGTTGTAAGAGACTGGTTGGGAGAG
TACTATGTGTGCC

Query= MSMg01no117_p05.g1 MSMg01no117_p05.g1 CHROMAT_FILE:
MSMg01no117_p05.g1 PHD_FILE: MSMg01no117_p05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:39 2005
         (556 letters)



>mm_chr8_24390397_24391352
          Length = 956

 Score = 1067 bits (552), Expect = 0.0
 Identities = 555/556 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tatcatgataggttggcacagaggatttagtggtctctagagagatgctacatcactgta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatcatgataggttggcacagaggatttagtggtctctagagagatgctacatcactgta 260

                                                                       
Query: 61  gggatacagagagcaggagaccactctcctcatagccaagaatggaagagggaggaagag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggatacagagagcaggagaccactctcctcatagccaagaatggaagagggaggaagag 320

                                                                       
Query: 121 actggtatcctagtgtcccctttctgggcatgctcccagtgacctgatgatgctctgtct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actggtatcctagtgtcccctttctgggcatgctcccagtgacctgatgatgctctgtct 380

                                                                       
Query: 181 ggctccaccttttaccacattcaacttctttcaagaaccacaagctgggcaccaatccta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggctccaccttttaccacattcaacttctttcaagaaccacaagctgggcaccaatccta 440

                                                                       
Query: 241 atacacaggtctttgggaagtgttcaaaatacggacgctatcaagcactgtctagctgtg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atacacaggtctttgggaagtgttcaaaatacggacgctatcaagcactgtctagctgtg 500

                                                                       
Query: 301 gcatattggtgaagtctcactattgggaatctgtttctccacagagatgctcctggagat 360
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 501 gcatattggtgaagtctcactattggaaatctgtttctccacagagatgctcctggagat 560

                                                                       
Query: 361 cctgatatttaccaagcctttaagtacactgtaatgggaagtaatgaaaactctgggatt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cctgatatttaccaagcctttaagtacactgtaatgggaagtaatgaaaactctgggatt 620

                                                                       
Query: 421 aggttatctctaagatttctgcctgttatagcttcctgtgtttctgtggaaaatatttca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aggttatctctaagatttctgcctgttatagcttcctgtgtttctgtggaaaatatttca 680

                                                                       
Query: 481 atccctgacccccaagaataaagttggtgctgggaaggaaatgagcaaagggatcttgtt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atccctgacccccaagaataaagttggtgctgggaaggaaatgagcaaagggatcttgtt 740

                           
Query: 541 atctttgacacatggt 556
           ||||||||||||||||
Sbjct: 741 atctttgacacatggt 756


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 956
Length adjustment: 10
Effective length of query: 546
Effective length of database: 946
Effective search space:   516516
Effective search space used:   516516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)