CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCACAATAATATTCCCACCCCAAACTTTTAAGTGCTAGACTACAGAAATG
TTTTCCCATCCTTGGATACTTTCAAAATGGTGCAAGGATTAAGTTTAAGG
CTTTGCGTATCTTTGACAAACCCTGAACTAATAATTAACCACACTATTTA
TCTTTTACTTTAAAAAAGAAAATGAAAAATATAAATAGGAGACTTTCTAA
ACCTCATAGTCAGAGAACAAAGAAGTGGTTGGGAAATATGTTAGCCACTT
CACAATAGAATTGAGTATCAATCTTTAGCATAAAACTCCTTAACCCACTG
TCAGCTGGGCTACTAGACTGGATGTAGTTGATATGGGGAGAATGGGGTAC
TTGATCCAGGGTTGATGCCAGGAGTTGGGAATAACAGAAGCTTGAAGTCA
CAAAAAACTTTCACTGAGTTAGTGGCTCTGGGTTCCCATCTTGAAAATTG
AAGAATGAAACTCATGGAAAAATTTTTTTTAAAGAACCCATCACTGATTC
TTTAGCAAGAGCTTAAGAGATAACAGCAGACAGACCTGGTCAACAAGAGT
AGGTCCCAGAAATGGGTTGCCATCAGTATACTAGGTGCTCTTTATAGCGA
AGAAACTTGTGGGGTTAAGGGTGTCCAGTGATTCGGATTAGACCACGCAT
AAA

CCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGA
GAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAA
TCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATC
AAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAAC
ACTCCTCCATTGTTGATGGGATTGCAGGCTTGTACAACCACTCTGGAAAT
CAGTCTGGCGGTTCTTCAGAAAATTGGGCATAGTACTACCGGAGGATCCA
GCAATACCTCTACTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAA
GGACACATGTTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAA
GCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATG
TGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATT
TATGAAATTCATAGCCAAAGGGATGGACCTGGAGGGCATCATCCTGAGTG
AGGTAACACATTCACAAAGGAACTCACACAATATGTACTCACTGATAAGT
GGATATTAGCCCAAAACCTAGGATACCCAAGATATAAGATACAATTTCCT
AAACAC

Query= MSMg01no118_a20.b1 MSMg01no118_a20.b1 CHROMAT_FILE:
MSMg01no118_a20.b1 PHD_FILE: MSMg01no118_a20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:47 2005
         (627 letters)



>mm_chr8_29033923_29034950
          Length = 1028

 Score =  986 bits (510), Expect = 0.0
 Identities = 599/632 (94%), Gaps = 11/632 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcacaataatattcccaccccaaacttttaagtgctagactacagaaatgttttcc 64
           ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 807 gaattcacaataatatttccaccccaaacttttaagtgctagactacagaaatg-tttcc 749

                                                                       
Query: 65  catccttggatactttcaaaatggtgcaaggattaagtttaaggctttgcgtatctttga 124
           |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 748 catccttggatacttttaaaatggtgcaaggattaagtttaaggcattgcgtatctttga 689

                                                                       
Query: 125 caaaccctgaactaataattaaccacactatttatcttttactttaaaaaagaaaatgaa 184
           ||||||||||||||||||  ||||| |||||||||||||||||||||||||||||| |||
Sbjct: 688 caaaccctgaactaataaggaaccagactatttatcttttactttaaaaaagaaaaagaa 629

                                                                       
Query: 185 aaatataaataggagactttctaaacctcatagtcagagaacaaagaagtggttgggaaa 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 aaatataaataggagactttctaaacctcatagtcagagaacaaagaagtggttgggaaa 569

                                                                       
Query: 245 tatgttagccacttcacaatagaattgagtatcaatctttagcataaaactccttaaccc 304
           |||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 568 tatgttagccacttcacagtagaattgagtatcactctttaacataaaactccttaaccc 509

                                                                       
Query: 305 actgtcagctgggctactagactggatgtagttgatatggggagaatggggtacttgatc 364
           |||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 508 actgtcagctgggctaatagactggatgttgttgatatggggagagtggggtacttgatc 449

                                                                       
Query: 365 cagggttgatgccaggagttgggaataacagaagcttgaagtcacaaaaaactttc-act 423
           ||||||||||| ||||| |||||| ||||||||||| ||||||||||||||| ||| |||
Sbjct: 448 cagggttgatgtcaggaattggga-taacagaagctcgaagtcacaaaaaaccttccact 390

                                                                       
Query: 424 gagttagtggctctgggttcccatcttgaaaatt-gaagaatgaaactcatggaaaaatt 482
           |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||  
Sbjct: 389 gagttagtggctctgggttcccatcttgaaaatttgaagaataaaactcatggaaaaaaa 330

                                                                       
Query: 483 ttttttaaa-gaacccatcactgattctttagcaagagcttaagagataacagcagacag 541
            |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 atttttaaaagaacccatcactgattctttagcaagagcttaagagataacagcagacag 270

                                                                       
Query: 542 acctggtcaacaagagtaggtcccagaaatgggttgccatcagtatactaggtgctcttt 601
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 269 acctggtcaacaagagtaggtcccagaaatgggttgccatcagtctactaggtgctcttt 210

                                           
Query: 602 atagc------gaagaaacttgtggggttaag 627
           |||||      |||||||||||||||||||||
Sbjct: 209 atagcacttatgaagaaacttgtggggttaag 178


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1028
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1018
Effective search space:   628106
Effective search space used:   628106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)