Query= MSMg01no118_o07.b1 MSMg01no118_o07.b1 CHROMAT_FILE:
MSMg01no118_o07.b1 PHD_FILE: MSMg01no118_o07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:53 2005
(656 letters)
>mm_chr8_70594563_70595618
Length = 1056
Score = 716 bits (370), Expect = 0.0
Identities = 382/386 (98%), Gaps = 2/386 (0%)
Strand = Plus / Minus
Query: 271 tttcataaacctctgatagcctttgtgagcacctatgtacatgtgatatctatgtgtaag 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1056 tttcataaacctctgatagcctttgtgagcacctatgtacatgtgatatctatgtataag 997
Query: 331 acacatatgcgtgcacatataaactcaaagataaatcttttaaaaagtgcaaaatatcaa 390
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 996 acacatatgcgtgcacatataaa-t-aaagataaatcttttaaaaagtgcaaaatatcaa 939
Query: 391 gaaaataaaatgttgactctttgaacgatcagtaaccttgataagcttctggccaagctg 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 938 gaaaataaaatgttgactctttgaacgatcagtaaccttgataagcttctggccaagctg 879
Query: 451 atgaagaaatagaagacataaaaggtcagtatctaaatcacaacaagtcatgaagacatt 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878 atgaagaaatagaagacataaaaggtcagtatctaaatcacaacaagtcatgaagacatt 819
Query: 511 gcgctattttaatgttttaccattgacaggtgaataccatgagatactttatcttaataa 570
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 gcgctattttaatgttttaacattgacaggtgaataccatgagatactttatcttaataa 759
Query: 571 tttggataatatagatgggatgagtaacactttttggaaggccactcaaagagttatagc 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 tttggataatatagatgggatgagtaacactttttggaaggccactcaaagagttatagc 699
Query: 631 atataatatatatgtgtgaatattga 656
||||||||||||||||||||||||||
Sbjct: 698 atataatatatatgtgtgaatattga 673
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space: 675716
Effective search space used: 675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no118_o07.g1 MSMg01no118_o07.g1 CHROMAT_FILE:
MSMg01no118_o07.g1 PHD_FILE: MSMg01no118_o07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:53 2005
(281 letters)
>mm_chr8_70461047_70461726
Length = 680
Score = 528 bits (273), Expect = e-154
Identities = 279/281 (99%), Gaps = 1/281 (0%)
Strand = Plus / Plus
Query: 1 cacatagtaattttcattattacatggaggaacagaacactggctcgccgcttagcagaa 60
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 cacatagtaattttcattattacatggaggaacagaacactggctcgt-gcttagcagaa 259
Query: 61 agtagttattccacaagtctttaggggtcctattgctaatccctttgtcctctaagtcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 agtagttattccacaagtctttaggggtcctattgctaatccctttgtcctctaagtcat 319
Query: 121 gaacaaaattactaggctatgttttaaagaaatgcaatgagcaagaaaatatgcctgaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gaacaaaattactaggctatgttttaaagaaatgcaatgagcaagaaaatatgcctgaag 379
Query: 181 agcttattgagaacttccaccttcaccagcatgctctgccgcatcactgttagtgcccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 agcttattgagaacttccaccttcaccagcatgctctgccgcatcactgttagtgcccaa 439
Query: 241 ggctttcagtcactctcagtagtaggtgtggaagacaagtg 281
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ggctttcagtcactctcagtagtaggtgtggaagacaagtg 480
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 680
Length adjustment: 9
Effective length of query: 272
Effective length of database: 671
Effective search space: 182512
Effective search space used: 182512
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
