Query= MSMg01no119_p22.b1 MSMg01no119_p22.b1 CHROMAT_FILE:
MSMg01no119_p22.b1 PHD_FILE: MSMg01no119_p22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:27:18 2005
(687 letters)
>mm_chr8_45088781_45089865
Length = 1085
Score = 1143 bits (591), Expect = 0.0
Identities = 633/647 (97%), Gaps = 2/647 (0%)
Strand = Plus / Plus
Query: 3 ggaattctaaactatgctgacgtccgtacccttatgatctaatgatgagaatctctggga 62
||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||
Sbjct: 203 ggaattctaaactatgcagatgtccgtacccttattatctaatgatgagaatctctggga 262
Query: 63 atactgccaatgtgtgggtatttcatacctgctgtaaaattgatcctgaagctcagccat 122
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 atactgccaatgtgtgggtatttcatacctgctgtaaaattgatcctgaagctcagccag 322
Query: 123 agctgaggactattggctttgggcaagaagtacaaactcacaattccctacactctagtt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 323 agctgaggactattggctttgggcaagaagtacaaactcacaattccctacactctaatt 382
Query: 183 ccaacctgtctttgaaatagcaccagcctcatcccctcacatatcccttattccattcag 242
|||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 383 ccaacctgtctttgaaatagcacc-gcctcaccccctcacatatcccttattccattcag 441
Query: 243 ttaggacattagagctttgagggggattttctctttctctctttcgatctccagtttcta 302
||||||||||||||||| || ||| ||||||||||||||||||||||||||||||| |||
Sbjct: 442 ttaggacattagagcttcga-gggcattttctctttctctctttcgatctccagttccta 500
Query: 303 actttcttccagtcttaagagtcttagccacccttcctgtctaccaatatctactatgtt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actttcttccagtcttaagagtcttagccacccttcctgtctaccaatatctactatgtt 560
Query: 363 gctccagggcccttgggctgaatgtgttatttatgaagctgtcacaagttaactgcaaga 422
||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 561 gctccagggcccttgggctgaatgtgttatttatgaaactgtcacaagttacctgcaaga 620
Query: 423 gtgattattttttatgatctgaatacagattagtattttgatacttatgatgctttttaa 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtgattattttttatgatctgaatacagattagtattttgatacttatgatgctttttaa 680
Query: 483 agtttactaagctgttgaattactatgattgggagaagactttgttaaagagaactgcat 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agtttactaagctgttgaattactatgattgggagaagactttgttaaagagaactgcat 740
Query: 543 tttaatctagatttcatcaccttagtaagccaaagtggaatgctgaacataaaattccca 602
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 741 tttaatctagatttcatcaccttagtaagccaaagtggaatgctgaaaataaaattccca 800
Query: 603 gtcttcatcccaagacagatgatataatcaatgcatgacccatatta 649
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gtcttcatcccaagacagatgatataatcaatgcatgacccatatta 847
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 687
Length of database: 1085
Length adjustment: 10
Effective length of query: 677
Effective length of database: 1075
Effective search space: 727775
Effective search space used: 727775
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no119_p22.g1 MSMg01no119_p22.g1 CHROMAT_FILE:
MSMg01no119_p22.g1 PHD_FILE: MSMg01no119_p22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:27:18 2005
(351 letters)
>mm_chr8_45211722_45212472
Length = 751
Score = 644 bits (333), Expect = 0.0
Identities = 342/345 (99%), Gaps = 2/345 (0%)
Strand = Plus / Minus
Query: 6 aattcttgatgatgtcactaaaattgacaatatgaactttgacttcttatattttctaag 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 aattcttgatgatgtcactaaaattgacaatatgaactttgacttcttatattttctaag 490
Query: 66 cattggaaagcactgaagtttcaaaggtcaaaatacttttattattttgaatgtcacaca 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 cattggaaagcactgaagtttcaaaggtcaaaatacttttattattttgaatgtcacaca 430
Query: 126 ctgtttattaccctttgctgagtatgttcataatgaatgtgacattaatcgagatgagct 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ctgtttattaccctttgctgagtatgttcataatgaatgtgacattaatcgagatgagct 370
Query: 186 cacatttgacaggtagaatattgttcacattatataatttgagggcattct-aagaaaat 244
||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 369 cacatttgacaggtagaattttgttcacattatataatttgagggcattctaaag-aaat 311
Query: 245 gacttaacagtgagacaacatctgacttgaactaatgagcttacagttgaattttgtgat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gacttaacagtgagacaacatctgacttgaactaatgagcttacagttgaattttgtgat 251
Query: 305 tgtgagaggttagtaaatggggtgtgtgtgggtatgtgtgagtat 349
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tgtgagaggttagtaaatggggtgtgtgtgggtatgtgtgagtat 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 351
Length of database: 751
Length adjustment: 9
Effective length of query: 342
Effective length of database: 742
Effective search space: 253764
Effective search space used: 253764
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
