Query= MSMg01no121_c11.b1 MSMg01no121_c11.b1 CHROMAT_FILE:
MSMg01no121_c11.b1 PHD_FILE: MSMg01no121_c11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:28:50 2005
(179 letters)
>mm_chr8_104177531_104178106
Length = 576
Score = 298 bits (154), Expect = 1e-85
Identities = 171/178 (96%), Gaps = 3/178 (1%)
Strand = Plus / Minus
Query: 1 gaagccacagttctgtgcacatatgtaactgtaggtaggagaggggaagtgacaagtgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gaagccacagttctgtgcacatatgtaactgtaggtaggagaggggaagtgacaagtgaa 316
Query: 61 ttatgggagttggtaggggccttactgaattataatttaataaactaaacaaagtaaaca 120
||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 315 ttatgggagttggtaggggccttgctgaattataatttaataaactaaacaaagcaaaca 256
Query: 121 aaaaaataacaacaacaacaacatgagcctcattgttggggagtttcatggattcagg 178
||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 255 aaaaagtaacaacaacaaca---tgagcctcactgttggggagtttcatggattcagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 179
Length of database: 576
Length adjustment: 8
Effective length of query: 171
Effective length of database: 568
Effective search space: 97128
Effective search space used: 97128
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no121_c11.g1 MSMg01no121_c11.g1 CHROMAT_FILE:
MSMg01no121_c11.g1 PHD_FILE: MSMg01no121_c11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:28:50 2005
(286 letters)
>mm_chr8_104116648_104117334
Length = 687
Score = 532 bits (275), Expect = e-155
Identities = 284/287 (98%), Gaps = 1/287 (0%)
Strand = Plus / Plus
Query: 1 ctttcatccaattatcatttgcctata-cacatttttctcatatatttttctgagtgggt 59
||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 201 ctttcatccaattatcatttgcctataccacatttttctcatatttttttctgagtgggt 260
Query: 60 tttgcttaaaacagacctctgaaatgcatcagctgaacggaaatcattcaaagcgatttt 119
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 tttgcttaaaacagacctctgaaatgcatcagctgaatggaaatcattcaaagcgatttt 320
Query: 120 tatctctaacagctaggaataaagttaaaattttaagggtttatataaaatctctacata 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatctctaacagctaggaataaagttaaaattttaagggtttatataaaatctctacata 380
Query: 180 aaatttccctaaagcctctgcattcataaaatgcttattaatttttgttgactcaggaac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaatttccctaaagcctctgcattcataaaatgcttattaatttttgttgactcaggaac 440
Query: 240 cttatcattttcaatgattccgctcagctataataaagttgtgcctt 286
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttatcattttcaatgattccgctcagctataataaagttgtgcctt 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 687
Length adjustment: 9
Effective length of query: 277
Effective length of database: 678
Effective search space: 187806
Effective search space used: 187806
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
