Query= MSMg01no122_f07.b1 MSMg01no122_f07.b1 CHROMAT_FILE:
MSMg01no122_f07.b1 PHD_FILE: MSMg01no122_f07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:30:40 2005
(327 letters)
>mm_chr8_87496689_87497415
Length = 727
Score = 617 bits (319), Expect = 0.0
Identities = 325/327 (99%), Gaps = 1/327 (0%)
Strand = Plus / Plus
Query: 1 ccatttttttcactccctccaccatgtgtgtgtgtataa-tttttttttttaaggaaagg 59
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 200 ccatttttttcactccctccaccatgtgtgtgtgtataattttttttttttaaggaaagg 259
Query: 60 gtctcactatattcatgttggcctggagctagctatgtaaatcaaactggccttgaactc 119
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gtctcaatatattcatgttggcctggagctagctatgtaaatcaaactggccttgaactc 319
Query: 120 agagagatctgcctgcctttacctctccagtgctgggattaaaggcacaagatgccatcc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agagagatctgcctgcctttacctctccagtgctgggattaaaggcacaagatgccatcc 379
Query: 180 ccccctcctcctttaaaaaattctttgtgtgagtgtgtgttagtgatcaaagcaaagccc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ccccctcctcctttaaaaaattctttgtgtgagtgtgtgttagtgatcaaagcaaagccc 439
Query: 240 caaacacaactacacacactcagtgaatactcactgagctatgcctccagcccagtcaca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 caaacacaactacacacactcagtgaatactcactgagctatgcctccagcccagtcaca 499
Query: 300 gtacctcagcatgtggaagggaaagct 326
|||||||||||||||||||||||||||
Sbjct: 500 gtacctcagcatgtggaagggaaagct 526
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 727
Length adjustment: 9
Effective length of query: 318
Effective length of database: 718
Effective search space: 228324
Effective search space used: 228324
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no122_f07.g1 MSMg01no122_f07.g1 CHROMAT_FILE:
MSMg01no122_f07.g1 PHD_FILE: MSMg01no122_f07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:30:40 2005
(377 letters)
>mm_chr8_87648375_87649151
Length = 777
Score = 681 bits (352), Expect = 0.0
Identities = 366/372 (98%), Gaps = 4/372 (1%)
Strand = Plus / Minus
Query: 7 gtgtcaggcctggcaaccagcatctttactccctt--cgtatcttgctggtcaggaactc 64
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 708 gtgtcaggcctggcaaccagcatctttactcccttgcc--atcttgctggtcaggaactc 651
Query: 65 actaagtagatcagatggatttatagatctgcttgcccttgctgggatccaaggtgtgta 124
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 650 actaagtagatcagatggatttatagatctgcttgcccttgctgggattaaaggtgtgta 591
Query: 125 taatcgcatccagcgggaaatatgtgttttaaatgaggctaacgtgtcactaaatgttat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 taatcgcatccagcgggaaatatgtgttttaaatgaggctaacgtgtcactaaatgttat 531
Query: 185 taaatactgtgtgcaaaactggcaaaactatttagatggaagctttgagaagcagtgggt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 taaatactgtgtgcaaaactggcaaaactatttagatggaagctttgagaagcagtgggt 471
Query: 245 tttcctggagcatctgaaactagaatgccatttccttggataccttgaacatagatataa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 tttcctggagcatctgaaactagaatgccatttccttggataccttgaacatagatataa 411
Query: 305 tgagaagcacacacctaatgcttccaggccaagctcctaaattctagggatttcctgaat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 tgagaagcacacacctaatgcttccaggccaagctcctaaattctagggatttcctgaat 351
Query: 365 ggcagaagtgtc 376
||||||||||||
Sbjct: 350 ggcagaagtgtc 339
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 377
Length of database: 777
Length adjustment: 9
Effective length of query: 368
Effective length of database: 768
Effective search space: 282624
Effective search space used: 282624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
