Query= MSMg01no123_c19.b1 MSMg01no123_c19.b1 CHROMAT_FILE:
MSMg01no123_c19.b1 PHD_FILE: MSMg01no123_c19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:32:32 2005
(276 letters)
>mm_chr8_26412969_26413644
Length = 676
Score = 534 bits (276), Expect = e-156
Identities = 276/276 (100%)
Strand = Plus / Minus
Query: 1 tcccagcacccactccaagaggctcacgactgcctacaaccccagctcagatctcatctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tcccagcacccactccaagaggctcacgactgcctacaaccccagctcagatctcatctc 560
Query: 61 atctctggtcgttgtgagcacctccactcatgtgggcacactcccgcgctgatatacaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 atctctggtcgttgtgagcacctccactcatgtgggcacactcccgcgctgatatacaca 500
Query: 121 tgatttaaaatgatacaaataaaacttaaaaataaaaagaggaagatggtattgtttaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tgatttaaaatgatacaaataaaacttaaaaataaaaagaggaagatggtattgtttaga 440
Query: 181 tccgaaacggccccttcaggcccacttgttatagaattggatatcagccttcaatactgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tccgaaacggccccttcaggcccacttgttatagaattggatatcagccttcaatactgc 380
Query: 241 tgcctgtctattgagagaaaatgaaggactttcagc 276
||||||||||||||||||||||||||||||||||||
Sbjct: 379 tgcctgtctattgagagaaaatgaaggactttcagc 344
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 276
Length of database: 676
Length adjustment: 9
Effective length of query: 267
Effective length of database: 667
Effective search space: 178089
Effective search space used: 178089
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no123_c19.g1 MSMg01no123_c19.g1 CHROMAT_FILE:
MSMg01no123_c19.g1 PHD_FILE: MSMg01no123_c19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:32:32 2005
(326 letters)
>mm_chr8_26293310_26294035
Length = 726
Score = 571 bits (295), Expect = e-167
Identities = 320/339 (94%), Gaps = 19/339 (5%)
Strand = Plus / Plus
Query: 1 ccacatctttcttctcctcttagctcggccattatggcctaaagacgccacacactaacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 ccacatctttcttctcctcttagctcggccattatggcctaaagacgccacacactaacg 253
Query: 61 tgatt-------gctagtctagtaactcggtactgagcaaatgtatagaaatgaatgccc 113
||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tgatttgtccttgctagtctagtaactcggtactgagcaaatgtatagaaatgaatgccc 313
Query: 114 tgctgcggcgtggcccgtgtgatgctcacaccctgtgaaatccccacactgaggctcaga 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tgctgcggcgtggcccgtgtgatgctcacaccctgtgaaatccccacactgaggctcaga 373
Query: 174 tgaaaggctgctcacaaacaccaaactggtttccaggccagatgcagaatgcttcaatta 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tgaaaggctgctcacaaacaccaaactggtttccaggccagatgcagaatgcttcaatta 433
Query: 234 gcagacctgaattaaggtcacagcttctgactgctcttgggattttttcc------tgat 287
|||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 434 gcagacctgaattaaggtcacagcttctgactgctcttggga------cccagccctgat 487
Query: 288 aggagggatttgtgccttgcctgatggcaacttgttacc 326
|||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aggagggatttgtgccttgcctgatggcaacttgttacc 526
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 726
Length adjustment: 9
Effective length of query: 317
Effective length of database: 717
Effective search space: 227289
Effective search space used: 227289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
