Query= MSMg01no123_f12.b1 MSMg01no123_f12.b1 CHROMAT_FILE:
MSMg01no123_f12.b1 PHD_FILE: MSMg01no123_f12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:32:57 2005
(160 letters)
>mm_chr8_113410178_113410737
Length = 560
Score = 302 bits (156), Expect = 8e-87
Identities = 159/160 (99%)
Strand = Plus / Minus
Query: 1 ctcagagctccctctgcttgaacagttgttacactcctttaatggtggctttgagctgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ctcagagctccctctgcttgaacagttgttacactcctttaatggtggctttgagctgca 301
Query: 61 cacgtggtcagagctgccgcacggctctggtcttggtaagccctggttccctgttgatac 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 300 cacgtggtcagagctgccgcacggctctggtcttggtaagccttggttccctgttgatac 241
Query: 121 cctgtggtcctgctccctggcctgcgtgcagcaccgagag 160
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 cctgtggtcctgctccctggcctgcgtgcagcaccgagag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 160
Length of database: 560
Length adjustment: 8
Effective length of query: 152
Effective length of database: 552
Effective search space: 83904
Effective search space used: 83904
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no123_f12.g1 MSMg01no123_f12.g1 CHROMAT_FILE:
MSMg01no123_f12.g1 PHD_FILE: MSMg01no123_f12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:32:57 2005
(376 letters)
>mm_chr8_113312830_113313603
Length = 774
Score = 683 bits (353), Expect = 0.0
Identities = 369/375 (98%), Gaps = 4/375 (1%)
Strand = Plus / Plus
Query: 1 agagaggctttgtttcctgttgtcggggtg-cctttccccgcccccagcacgcaggggtc 59
|||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 201 agagaggctttgtttcctgttgtcggggtgtcct--ccccgcccccagcacgcaggggtc 258
Query: 60 cggccacgggtttggctttacacttgttgactttgggttcatgtctcattcttccgtgga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 cggccacgggtttggctttacacttgttgactttgggttcatgtctcattcttccgtgga 318
Query: 120 tgctgtagggactacacgccctagcccatcctcgggcctggcgctctccagggctctgtc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tgctgtagggactacacgccctagcccatcctcgggcctggcgctctccagggctctgtc 378
Query: 180 atacccacaagccccggaactgattacctctttggactctccagatcccgctggaacaag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 atacccacaagccccggaactgattacctctttggactctccagatcccgctggaacaag 438
Query: 240 aattccaggcccctaagtcagagcatcagtcaagcaataaacgccaaagagcctgctgca 299
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 439 aattccaggcccctaagtcagagcatcagtcaagcaatgaacgccaaagagcctgctgca 498
Query: 300 gaagattagggcagctcttctgctctcctgtatctgcacgggcagctgcgaagggatgca 359
||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 499 gaagattagggcagctcttctgctc-cctgtatctgcacgggcagctgggaagggatgca 557
Query: 360 tgactccccaggctg 374
|||||||||||||||
Sbjct: 558 tgactccccaggctg 572
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 774
Length adjustment: 9
Effective length of query: 367
Effective length of database: 765
Effective search space: 280755
Effective search space used: 280755
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
