Query= MSMg01no124_h20.b1 MSMg01no124_h20.b1 CHROMAT_FILE:
MSMg01no124_h20.b1 PHD_FILE: MSMg01no124_h20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:35:39 2005
(323 letters)
>mm_chr8_58951320_58952042
Length = 723
Score = 555 bits (287), Expect = e-162
Identities = 314/323 (97%)
Strand = Plus / Plus
Query: 1 actctctggcagatcctctgttctgttcttagggtgaacatgaataaaataaccaatatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actctctggcagatcctctgttctgttcttagggtgaacatgaataaaataaccaatatt 260
Query: 61 ctcacactgaatgttatgcttgagaaaagcaatgagcctcatgacacttcaagaagctct 120
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcatagtgaatgttatgcttgagaaaagcaatgagcctcatgacacttcaagaagctct 320
Query: 121 agccagagatgggggaaagactgtgaaagaccgtcttttagacaaaacacagccactgcg 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agccagagatgggggaaaggctgtgaaagaccgtcttttagacaaaacacagccactgcg 380
Query: 181 attgtgaactcatagcaactatgtgagcctgtgcctggttttcaaagaatgaacacatca 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 381 attgtgaactcatagcaactatgtgagcctgtgcttggttttcaaagaatgaacacatca 440
Query: 241 acagccagacacagatagaaaaggaactcatggagccctgccctttactgataaactgtt 300
|||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||
Sbjct: 441 acagccagacacagatagaaaaagaactcatggagccctgccccttactgatgaactgtt 500
Query: 301 gactgctatttatattcagggag 323
||||||||||| ||||||||||
Sbjct: 501 tactgctatttagattcagggag 523
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no124_h20.g1 MSMg01no124_h20.g1 CHROMAT_FILE:
MSMg01no124_h20.g1 PHD_FILE: MSMg01no124_h20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:35:39 2005
(332 letters)
>mm_chr8_59097022_59097750
Length = 729
Score = 586 bits (303), Expect = e-172
Identities = 325/333 (97%), Gaps = 5/333 (1%)
Strand = Plus / Minus
Query: 1 tttgtcactttagatttttctacagcaatgatagttggctattcaattttactttgcaga 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 tttgtcactttacatttttctacagcaatgatagttggctattcaattttactttgcaga 470
Query: 61 aaaaaaaataattccttttcaaatgataacaaaaagtatgcctggcttttaaacattctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 aaaaaaaataattccttttcaaatgataacaaaaagtatgcctggcttttaaacattctc 410
Query: 121 taatttgtaaacaaaacgttttgatgcatacataaaaaacaataaaaatgaagttatatt 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 409 taatttgtaaacaaaacgttttgatgcatacat-aaaaacaataaaaatgaagttatatt 351
Query: 181 ttagaaatgaacaggatccattttttctaatataaagaaagactcactgtgatataacca 240
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 350 ttagaaatgaacagaatccattttttctaatataaagaaagactcactgtgatataagca 291
Query: 241 ggaaagaacagataactctgtgcttaacagcgttttctttgtaattctcaagcataagtg 300
|| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gg-aagaacagataa--ctgtgcttaacagcgttttctttgtaattctcaagcataagtg 234
Query: 301 gattagttgaaaaaaaa-tcacattgcagaaat 332
||||||||||||||||| |||||||||||||||
Sbjct: 233 gattagttgaaaaaaaattcacattgcagaaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 729
Length adjustment: 9
Effective length of query: 323
Effective length of database: 720
Effective search space: 232560
Effective search space used: 232560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
