Query= MSMg01no124_o03.b1 MSMg01no124_o03.b1 CHROMAT_FILE:
MSMg01no124_o03.b1 PHD_FILE: MSMg01no124_o03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:36:34 2005
(594 letters)
>mm_chr8_98457275_98458268
Length = 994
Score = 1141 bits (590), Expect = 0.0
Identities = 593/594 (99%)
Strand = Plus / Minus
Query: 1 aacctctttcaaagtcactcaacacaccagcgctcagggggcccttttatctgctaaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 aacctctttcaaagtcactcaacacaccagcgctcagggggcccttttatctgctaaaga 843
Query: 61 aagaccacacagcagtagcttaggagccatagaccaaatgactgaccttgagtcaccttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 aagaccacacagcagtagcttaggagccatagaccaaatgactgaccttgagtcaccttc 783
Query: 121 tggcccaggcaagatagagagttgaagttgtctctagtagcaacagcaattatgatctga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 tggcccaggcaagatagagagttgaagttgtctctagtagcaacagcaattatgatctga 723
Query: 181 tgatacagagaagccagtcaaggataataataaaaaaataaaaagctaaatcgtgttctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 tgatacagagaagccagtcaaggataataataaaaaaataaaaagctaaatcgtgttctt 663
Query: 241 catagggctcttagagcttaaaaggcactcacatttgctgtctgcttggccctttcacat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 catagggctcttagagcttaaaaggcactcacatttgctgtctgcttggccctttcacat 603
Query: 301 taaaagcaacctttccattttccccttgtccagggagcaagcaattccagaaccaaagaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 taaaagcaacctttccattttccccttgtccagggagcaagcaattccagaaccaaagaa 543
Query: 361 caggtccatcagagccaggatgtctgaatgggcttggttcttacctgtttgtgaaattga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 caggtccatcagagccaggatgtctgaatgggcttggttcttacctgtttgtgaaattga 483
Query: 421 atggaattatttttagagttgcttgaagaaacccttaaatcatccctctaagctctggtc 480
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 482 atggaattatttttagagttgcttgaagaaacccttaaattatccctctaagctctggtc 423
Query: 481 tccctctccctctccttcccccctccccctctccctctcccctcctgttcctccctccct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tccctctccctctccttcccccctccccctctccctctcccctcctgttcctccctccct 363
Query: 541 ccgctttgatcacattgccgggtatgtactgtgaatgtgcacacatggaggcca 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ccgctttgatcacattgccgggtatgtactgtgaatgtgcacacatggaggcca 309
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 994
Length adjustment: 10
Effective length of query: 584
Effective length of database: 984
Effective search space: 574656
Effective search space used: 574656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no124_o03.g1 MSMg01no124_o03.g1 CHROMAT_FILE:
MSMg01no124_o03.g1 PHD_FILE: MSMg01no124_o03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:36:34 2005
(633 letters)
>mm_chr8_98310967_98311998
Length = 1032
Score = 1164 bits (602), Expect = 0.0
Identities = 626/634 (98%), Gaps = 2/634 (0%)
Strand = Plus / Plus
Query: 1 tctaacttcttgagttctttgtatatattggatattagccctctataggatataaggttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tctaacttcttgagttctttgtatatattggatattagccctctataggatataaggttg 259
Query: 61 gtaattttttgaaacaaaagttacaggatgggcaggtctcaaa-aatcctgcttccgtct 119
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 260 gtaattttttgaaacaaaagttacaggatgggcaggtctcaaacaatcctgcttccgtct 319
Query: 120 ttaggaattctgtttcaatctccatgtgggagcacatcacacttagctagctactttatg 179
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 320 ttaggaattctgtttcaatctccatgtgggagcacatcacacttagctggctactttatg 379
Query: 180 ttcataaaaattgaataaaatactaacacatgtaaaatctacactactgaaagtaaggat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttcataaaaattgaataaaatactaacacatgtaaaatctacactactgaaagtaaggat 439
Query: 240 ttaaagagctggcttcttatatgtatgttcatgtgtgtgttaacacaaggacatcagata 299
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 440 ttaaagagctggcttcttatatgtatgttcatgtgtgtgtgaacacaaggacatcagata 499
Query: 300 ccctggaacaggacttaagtggggttgtaagtcacccaatgtgtgtgctacaaaccaaat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ccctggaacaggacttaagtggggttgtaagtcacccaatgtgtgtgctacaaaccaaat 559
Query: 360 tccagttcactgaaagagcagcaggtgctccttactgcaaagccatccccccagctccag 419
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 560 tccagttcactgaaagagcagcaggtgctccttactgcaaagccatctccccagctccag 619
Query: 420 aaggaaaaaatttaacaggtacttcccaaagatgcagacttgatagtgggacacaagcat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aaggaaaaaatttaacaggtacttcccaaagatgcagacttgatagtgggacacaagcat 679
Query: 480 tcagcaccattgcttgtgactcaaagcgtcccacccaggaggacggctagcagcccacgg 539
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 680 tcagcaccattgcttgtgactcaaagcgtcccacccaggaggacggctagcagcccaccg 739
Query: 540 gtaactgtcactgagttgtgctaaacaagcactccaccgctgagtatcttacgcctccag 599
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gtaactgtcactgacttgtgctaaacaagcactccaccgctgagtatcttacgcctccag 799
Query: 600 tgcagttccctccttttcttctgtatacatggat 633
||||| ||||||||||| ||||||||||||||||
Sbjct: 800 tgcagctccctcctttt-ttctgtatacatggat 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1032
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1022
Effective search space: 636706
Effective search space used: 636706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
