Query= MSMg01no129_g16.b1 MSMg01no129_g16.b1 CHROMAT_FILE:
MSMg01no129_g16.b1 PHD_FILE: MSMg01no129_g16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:49 2005
(237 letters)
>mm_chr8_87648530_87649166
Length = 637
Score = 455 bits (235), Expect = e-132
Identities = 235/235 (100%)
Strand = Plus / Minus
Query: 1 cagatggatttatagatctgcttgcccttgctgggattaaaggtgtgtataatcgcatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 cagatggatttatagatctgcttgcccttgctgggattaaaggtgtgtataatcgcatcc 425
Query: 61 agcgggaaatatgtgttttaaatgaggctaacgtgtcactaaatgttattaaatactgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 agcgggaaatatgtgttttaaatgaggctaacgtgtcactaaatgttattaaatactgtg 365
Query: 121 tgcaaaactggcaaaactatttagatggaagctttgagaagcagtgggttttcctggagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tgcaaaactggcaaaactatttagatggaagctttgagaagcagtgggttttcctggagc 305
Query: 181 atctgaaactagaatgccatttccttggataccttgaacatagatataatgagaa 235
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 atctgaaactagaatgccatttccttggataccttgaacatagatataatgagaa 250
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 637
Length adjustment: 9
Effective length of query: 228
Effective length of database: 628
Effective search space: 143184
Effective search space used: 143184
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no129_g16.g1 MSMg01no129_g16.g1 CHROMAT_FILE:
MSMg01no129_g16.g1 PHD_FILE: MSMg01no129_g16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:49 2005
(161 letters)
>mm_chr8_87565826_87566384
Length = 559
Score = 292 bits (151), Expect = 7e-84
Identities = 158/161 (98%), Gaps = 2/161 (1%)
Strand = Plus / Plus
Query: 1 gtaatgaagacagaaaaatactcctgaattagagctagatgtttgggcctgttgggttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtaatgaagacagaaaaatactcctgaattagagctagatgtttgggcctgttgggttaa 260
Query: 61 accaaatattcagggtgggggggggggagattgagtctatatatatttagatttctttcc 120
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 accaaatattcagggtggggggggg--agattgagtctatatatatttagatttctttcc 318
Query: 121 ttagcaatatattgttttgttttaaacttacttgtgtggag 161
||||||||||| |||||||||||||||||||||||||||||
Sbjct: 319 ttagcaatatagtgttttgttttaaacttacttgtgtggag 359
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 161
Length of database: 559
Length adjustment: 8
Effective length of query: 153
Effective length of database: 551
Effective search space: 84303
Effective search space used: 84303
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
