Query= MSMg01no129_l06.b1 MSMg01no129_l06.b1 CHROMAT_FILE:
MSMg01no129_l06.b1 PHD_FILE: MSMg01no129_l06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:43:13 2005
(438 letters)
>mm_chr8_101692353_101693189
Length = 837
Score = 598 bits (309), Expect = e-175
Identities = 398/435 (91%), Gaps = 17/435 (3%)
Strand = Plus / Minus
Query: 14 gaattcaccaaacagttgcctaagaaacatttcagggcaatctagaaacaaaagattcat 73
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gaattcaccaaacaggtgtttaagaaacatttcagggcaatctagaaacaaaagattca- 429
Query: 74 ttttcaaagaatctcaccctgggaaagacaaaagaaaacagatgttctgggccaatgagc 133
||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ttttcaaggaatctcaaaatgggaaagacaaaagaaaacagatgttctgggccaatgagc 369
Query: 134 tattaacttcaggaagacaagagtaccaaccccccatcagggaagacgcgggtcggtttc 193
||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 368 tattaacttcaggaagacaagagtaccaaacccccatcagggaagacgtgggtcggtttc 309
Query: 194 ttacttcaggaatcattgaatctgtcactcatagcacccatatattcagtgt-ggatact 252
|||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||
Sbjct: 308 ttacttcaggaatcattgaatctgtcactcatagcacccatatatttagtgtcgg-tact 250
Query: 253 tcagggaataaagccacccaaacctctgcccagctttcc--------cccccttaggcct 304
|||||||||||||||||||||||||||||||||||| || ||||| || |||
Sbjct: 249 tcagggaataaagccacccaaacctctgcccagcttcccaccaccacccccccaagccct 190
Query: 305 ggaagcaccaactgtgaatcagtttaccaggttgggttgatccatagagaggtagagggg 364
||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 189 ggaagcacctcctgtgaatcagtataccgggttgggttgatccatagagaggtagagggg 130
Query: 365 tgagaaaaaccatgagtgcatgcaacacaatctgttttattttacagagga--aaaaaaa 422
||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||
Sbjct: 129 tgagaaaaaccatgagtgcctgcaacacaatctgttttattttagagaggaggaaaaaaa 70
Query: 423 aaaaacctcaaaaga 437
| ||||||||||
Sbjct: 69 a----cctcaaaaga 59
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 837
Length adjustment: 9
Effective length of query: 429
Effective length of database: 828
Effective search space: 355212
Effective search space used: 355212
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no129_l06.g1 MSMg01no129_l06.g1 CHROMAT_FILE:
MSMg01no129_l06.g1 PHD_FILE: MSMg01no129_l06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:43:13 2005
(296 letters)
>mm_chr8_101588586_101589281
Length = 696
Score = 528 bits (273), Expect = e-154
Identities = 291/297 (97%), Gaps = 2/297 (0%)
Strand = Plus / Plus
Query: 1 agtcacttcaaaccttcctctcatggaactattatattaatgtgtgacatgcactattta 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 agtcacttcaaaccttcctctcatggaactattatattaatttgtgacatgcactattta 260
Query: 61 ttttcattctcc-catcttatgaagaataatccttagagggaaaacactgaaatcagtaa 119
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttttcattc-ccacatcttatgaagaataatccttagagggaaaacactgaaatcagtaa 319
Query: 120 tctataaactaggataggattcttaaatccaggactctgtctctagtgtttatgttctac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tctataaactaggataggattcttaaatccaggactctgtctctagtgtttatgttctac 379
Query: 180 ctattgaaattccttttctaaatcaaattccagagaagaatggagtagaaaagcaagaat 239
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ctactgaaattccttttctaaatcaaattccagagaagaatggagtagaaaagcaagaat 439
Query: 240 tgaacattcatgttcatgcttttattttatcatgttatgtgtaaatgccatttctgt 296
||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 440 tgaacattcatgttcatccttttattttattatgttatgtgtaaatgccatttctgt 496
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 696
Length adjustment: 9
Effective length of query: 287
Effective length of database: 687
Effective search space: 197169
Effective search space used: 197169
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
