Query= MSMg01no131_e04.b1 MSMg01no131_e04.b1 CHROMAT_FILE:
MSMg01no131_e04.b1 PHD_FILE: MSMg01no131_e04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:25 2005
(604 letters)
>mm_chr8_122620906_122621910
Length = 1005
Score = 1056 bits (546), Expect = 0.0
Identities = 591/606 (97%), Gaps = 3/606 (0%)
Strand = Plus / Minus
Query: 1 ccagactgtgtactgtgtcttattggcacagcacctgatcttttaccac-ttctgtatcc 59
|||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||
Sbjct: 805 ccagactgtgtactgtgtcttattggcacagcacctgatcatttaaaacattctgtatcc 746
Query: 60 aatcagtcttgaagatagtgggtgcctaaaaattggtgaatgaattcttgtgcgaggcag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aatcagtcttgaagatagtgggtgcctaaaaattggtgaatgaattcttgtgcgaggcag 686
Query: 120 agagattgaaaatgaattttgattggaagaagcagaagccaggaggagcttaccaaatga 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agagattgaaaatgaattttgattggaagaagcagaagccaggaggagcttaccaaatga 626
Query: 180 gtaccttgtggggagaggtggaaggactgagcctggaccagaatgggggagaggaaaaca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gtaccttgtggggagaggtggaaggactgagcctggaccagaatgggggagaggaaaaca 566
Query: 240 gcgctgatagatttggggaactgagctgtggttttgaacaataactctagatactggaat 299
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gcgctgagagatttggggaactgagctgtggttttgaacaataactctagatactggaat 506
Query: 300 cttcctctgggctccttgttacccctggggaaagaattcacatgaaacacag-attagtg 358
||| |||||||||||||||||||||||||||||||||||| ||||||||||| | |||||
Sbjct: 505 cttgctctgggctccttgttacccctggggaaagaattcagatgaaacacagca-tagtg 447
Query: 359 tgggacactctcgagggtgagagtggacagtggcccaggggaccatcatggagggaaatg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tgggacactctcgagggtgagagtggacagtggcccaggggaccatcatggagggaaatg 387
Query: 419 cagggtgacagtgactggagagcccgtcttgctggcccacaggtttaggcaagtttcacg 478
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 386 cagggtgacagtgactggagagcccgtcttgctggcccacaggtttaggcaagcttcacg 327
Query: 479 ctatgctactggagtgtctgtggcagacaactttcctgagaggtaccttcctgtgcaggt 538
||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 326 ctatgctgctggagtgtctgtggcagacagctttcctgagagataccttcctgtgcaggt 267
Query: 539 gattgacaggcccgccggattaatcccgaaggattgtactgcatgcaagtggggtgggct 598
||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 266 gattgacaggcccgcaggattaatcccgaaggattgtactgcatgctagtggggtgggct 207
Query: 599 gcttag 604
||||||
Sbjct: 206 gcttag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1005
Length adjustment: 10
Effective length of query: 594
Effective length of database: 995
Effective search space: 591030
Effective search space used: 591030
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no131_e04.g1 MSMg01no131_e04.g1 CHROMAT_FILE:
MSMg01no131_e04.g1 PHD_FILE: MSMg01no131_e04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:25 2005
(146 letters)
>mm_chr8_122454030_122454572
Length = 543
Score = 230 bits (119), Expect = 2e-65
Identities = 137/143 (95%), Gaps = 3/143 (2%)
Strand = Plus / Plus
Query: 1 gtggaagtaagacatcagcatttagtttcttagtttttaaaacctcctgcctgctatata 60
||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 gtggaagtaagacgtcagcatttagtttcttagtttttaaaacctcctggttgctatata 260
Query: 61 catcgattctgccactaaacacaccagtatgaagtttttaataagtgatttagagtttag 120
|||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 261 catcgattctgccactaaacacaccagt-tgaagtttttaataagtgattt-gagtttag 318
Query: 121 tctaggtgttcaccattcatact 143
||| |||||||||||||||||||
Sbjct: 319 tct-ggtgttcaccattcatact 340
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 146
Length of database: 543
Length adjustment: 8
Effective length of query: 138
Effective length of database: 535
Effective search space: 73830
Effective search space used: 73830
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
