Query= MSMg01no132_i02.b1 MSMg01no132_i02.b1 CHROMAT_FILE:
MSMg01no132_i02.b1 PHD_FILE: MSMg01no132_i02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:02 2005
(648 letters)
>mm_chr8_94589969_94591018
Length = 1050
Score = 1218 bits (630), Expect = 0.0
Identities = 642/648 (99%), Gaps = 6/648 (0%)
Strand = Plus / Minus
Query: 5 gaattcaaagcaagt--tcctcaaaaggtgtgaagcctcagttgaggctgggtgctgcca 62
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 gaattcaaagcaagtagt--tcaaaaggtgtgaagcctcagttgaggctgggtgctgcca 793
Query: 63 atatgctgccatagaggcccggaggacctgggcacagctgggactcgaacttgtagagaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 atatgctgccatagaggcccggaggacctgggcacagctgggactcgaacttgtagagaa 733
Query: 123 agggaaactaattttctcagttccagg--aaaaaaaatggcttgaggcctcctaagtgcc 180
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 732 agggaaactaattttctcagttccaggaaaaaaaaaatggcttgaggcctcctaagtgcc 673
Query: 181 ccctcctgacaggcagctgcagcaggctgggtagagcaggcagacagcaccggcttccca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 ccctcctgacaggcagctgcagcaggctgggtagagcaggcagacagcaccggcttccca 613
Query: 241 agcaccatatgggtaaagtgctccctccaaggctgcgcccgccctacttgtcacccccaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 agcaccatatgggtaaagtgctccctccaaggctgcgcccgccctacttgtcacccccaa 553
Query: 301 tcacacttgctctaatctgtgttttaatttactctgctggtgcgacacccgtgctgccag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 tcacacttgctctaatctgtgttttaatttactctgctggtgcgacacccgtgctgccag 493
Query: 361 ggcggtccttggggcctcttcattcctgctgctgatgacaggaagtatgcaaaaggtaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ggcggtccttggggcctcttcattcctgctgctgatgacaggaagtatgcaaaaggtaca 433
Query: 421 attattcacccaccgaggtgacagagaaggcctctgactgggaataggttcccagctccc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 attattcacccaccgaggtgacagagaaggcctctgactgggaataggttcccagctccc 373
Query: 481 agcagttttgtgtcagccacggaagcactttgcagcttgcaaacaatcctatggagaccg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 agcagttttgtgtcagccacggaagcactttgcagcttgcaaacaatcctatggagaccg 313
Query: 541 ctcccccccttcttcttcttctttttttaaataagcattttgatcacagccagtaaggag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ctcccccccttcttcttcttctttttttaaataagcattttgatcacagccagtaaggag 253
Query: 601 gtggatggcagtcattgattcttcaggccagtgcagagaggggtggcc 648
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gtggatggcagtcattgattcttcaggccagtgcagagaggggtggcc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1050
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1040
Effective search space: 663520
Effective search space used: 663520
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no132_i02.g1 MSMg01no132_i02.g1 CHROMAT_FILE:
MSMg01no132_i02.g1 PHD_FILE: MSMg01no132_i02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:02 2005
(622 letters)
>mm_chr8_94491792_94492813
Length = 1022
Score = 1156 bits (598), Expect = 0.0
Identities = 614/622 (98%), Gaps = 6/622 (0%)
Strand = Plus / Plus
Query: 1 tactcaccaccagctcgaggcccttgtgttttaagagaaacgctgcaagcagctcagaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tactcaccaccagctcgaggcccttgtgttttaagagaaacgctgcaagcagctcagaat 260
Query: 61 ttatgtttaattcagagagatgctttaaaaagtctctgagagagaaaggtgatggcgatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttatgtttaattcagagagatgctttaaaaagtctctgagagagaaaggtgatggcgatc 320
Query: 121 ctgccgtgaggagggtgcggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgacagggcc 180
|||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 321 ctgccgtgaggagggtgcgg-g-----gtgtgtgtgtgtgtgtgtgtgtgtgacagggcc 374
Query: 181 acataaagactggagtctgcattagcaccagacacatgagctcatccacagaatcttaat 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 375 acataaagactggagtctgcgttagcaccagacacatgagctcatccacagaatcttaat 434
Query: 241 gctgtgagcatctctgctgtgtgtggttcatccatctctatctggatctttttgcttttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gctgtgagcatctctgctgtgtgtggttcatccatctctatctggatctttttgcttttt 494
Query: 301 aaatttttttattatttatttatttatttatttattttggatggatgaaatatcagcagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 aaatttttttattatttatttatttatttatttattttggatggatgaaatatcagcagt 554
Query: 361 gaacatggctggcactgaaattaggaagacaagatgtagctactgggaacgacctttttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gaacatggctggcactgaaattaggaagacaagatgtagctactgggaacgacctttttc 614
Query: 421 tggacgcatcactggaaagagaagctggccggtgtttgctggggcactccttccatgacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 tggacgcatcactggaaagagaagctggccggtgtttgctggggcactccttccatgacc 674
Query: 481 tttgaactctgaggcaggttcagagcagggctctagaggtgctgtctctgtcagacggtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 tttgaactctgaggcaggttcagagcagggctctagaggtgctgtctctgtcagacggtg 734
Query: 541 gcatcagagacaggtgaagaggagcaggaggcaggctaggtaagtccgggcagaggtggt 600
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 735 gcatcagagacaggtgaagaggagcaggaggcaggccaggtaagtccgggcagaggtggt 794
Query: 601 agtcaatgacgcgggggacatt 622
||||||||||||||||||||||
Sbjct: 795 agtcaatgacgcgggggacatt 816
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space: 619344
Effective search space used: 619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
