Query= MSMg01no133_b08.b1 MSMg01no133_b08.b1 CHROMAT_FILE:
MSMg01no133_b08.b1 PHD_FILE: MSMg01no133_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:48 2005
(219 letters)
>mm_chr8_82537250_82537868
Length = 619
Score = 325 bits (168), Expect = 1e-93
Identities = 204/216 (94%), Gaps = 2/216 (0%)
Strand = Plus / Minus
Query: 1 agaagtcattgcttgtcttttactaattcttactttggtttgttgaaagcaccatcttac 60
|||| ||||||||||||||||||||||| ||||||||||||||||| |||||| ||| ||
Sbjct: 390 agaaatcattgcttgtcttttactaattattactttggtttgttgagagcaccgtctcac 331
Query: 61 atgattcaaacatgagaaaacattgtacattggtcctttggcccaaacttccattgttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 330 atgattcaaacatgagaaaacattgtacattggtcctttggcccaaacttccattgtccc 271
Query: 121 tagtgacctaaagtgatgtttcttttgagaaaggatagggatcagcacctctcatggaaa 180
|||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 270 tagtgacctaaagtgacgtttcttttgagaaaggatggggatcagcacctctcatggaaa 211
Query: 181 aggagaacagctctcctctcctctcctctcctctcc 216
||||||||||||| |||| || ||||||||| ||||
Sbjct: 210 aggagaacagctcccctc-cc-ctcctctcccctcc 177
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 219
Length of database: 619
Length adjustment: 9
Effective length of query: 210
Effective length of database: 610
Effective search space: 128100
Effective search space used: 128100
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no133_b08.g1 MSMg01no133_b08.g1 CHROMAT_FILE:
MSMg01no133_b08.g1 PHD_FILE: MSMg01no133_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:48 2005
(370 letters)
>mm_chr8_82446580_82447349
Length = 770
Score = 679 bits (351), Expect = 0.0
Identities = 368/379 (97%), Gaps = 10/379 (2%)
Strand = Plus / Plus
Query: 1 ctagaggaaaaaaaactgtatacgtgaataataaaaagtgttatgctagcaaacatgtat 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ctagaggaaaaaaa-ctgtatacgtgaataataaaaagtgttatgctagcaaacatgtat 260
Query: 61 gttacatgtatgtatgtatatgagtgtacatgtatatgtatattcctaagtttgagactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttacatgtatgtatgtatatgagtgtacatgtatatgtatattcctaagtttgagactt 320
Query: 121 atacatccactgtctgctgagaaacgaagggtgaaaggtgtaaaagtttccatggttgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atacatccactgtctgctgagaaacgaagggtgaaaggtgtaaaagtttccatggttgct 380
Query: 181 tgggccatccctcggctctgtgaaaagacagaatatggcaacaaaatcatgcactacaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgggccatccctcggctctgtgaaaagacagaatatggcaacaaaatcatgcactacaca 440
Query: 241 gagctttttacttcatggtgtctgggagtcagagacaagaggggaccagtttgtcattga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagctttttacttcatggtgtctgggagtcagagacaagaggggaccagtttgtcattga 500
Query: 301 agccatggcctctgtggtctacttcctcaaagcatgtccttcctctgctgcttc------ 354
|||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 501 agccatggcctctgtggtctacttcctcaaagtatgtccttcctctgctgcttccactgc 560
Query: 355 ---tcagtggtccagccaa 370
||||||||||||||||
Sbjct: 561 ttctcagtggtccagccaa 579
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space: 274721
Effective search space used: 274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
