Query= MSMg01no133_b16.b1 MSMg01no133_b16.b1 CHROMAT_FILE:
MSMg01no133_b16.b1 PHD_FILE: MSMg01no133_b16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:49 2005
(662 letters)
>mm_chr8_42943572_42944632
Length = 1061
Score = 1234 bits (638), Expect = 0.0
Identities = 653/658 (99%), Gaps = 1/658 (0%)
Strand = Plus / Plus
Query: 5 gaattcttctcatgaatgcaaataacatttcttaatctcccacagctggttcaagaagta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttctcatgaatgcaaataacatttcttaatctcccacagctggttcaagaagta 264
Query: 65 tgcttgttgacccacctagaggagattcctaaaaaggggataaagagaaggaagaaaaaa 124
|||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgcttgatgaatcacctagaggagattcctaaaaaggggataaagagaaggaagaaaaaa 324
Query: 125 aaaaaaanaaaatgcagaaggttatacaatccttgagttgcctattaaggacttaacgta 184
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaaaaaa-caaatgcagaaggttatacaatccttgagttgcctattaaggacttaacgta 383
Query: 185 tgcaaaataggcagtctgtgaagaattgcttcaggaagaagccaccaggctttctcttgg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgcaaaataggcagtctgtgaagaattgcttcaggaagaagccaccaggctttctcttgg 443
Query: 245 gctatggaaagacctggtcagaattttgatgctttcaaaatgcagaatgtctcagatcag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gctatggaaagacctggtcagaattttgatgctttcaaaatgcagaatgtctcagatcag 503
Query: 305 atggcatttctatcagatggcaattctctgaactaataaagccctttggaaaccatactt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 atggcatttctatcagatggcaattctctgaactaataaagccctttggaaaccatactt 563
Query: 365 tctgtagatatcaaaacaattcccttgtgggtgaaagaaaacgttttcctcaaaattata 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tctgtagatatcaaaacaattcccttgtgggtgaaagaaaacgttttcctcaaaattata 623
Query: 425 taggtcaaggtttcttaatgtaaatcttctctgatacctttctaaagaaatctgggtact 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 taggtcaaggtttcttaatgtaaatcttctctgatacctttctaaagaaatctgggtact 683
Query: 485 cctaaaacccacccgcagctttcaagtggatttatcaataaaagcaacaataggtgtacg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 cctaaaacccacccgcagctttcaagtggatttatcaataaaagcaacaataggtgtacg 743
Query: 545 gtgtattgtgatttgccttggaagaactgtttggagattgctggaggcagcagaacccct 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gtgtattgtgatttgccttggaagaactgtttggagattgctggaggcagcagaacccct 803
Query: 605 gtcggcaggcacagaagggcacacttggcatcttgctggtaccagagcaaccgaaagc 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 gtcggcaggcacagaagggcacacttggcatcttgctggtaccagagcaaccgaaagc 861
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1061
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1051
Effective search space: 685252
Effective search space used: 685252
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no133_b16.g1 MSMg01no133_b16.g1 CHROMAT_FILE:
MSMg01no133_b16.g1 PHD_FILE: MSMg01no133_b16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:49 2005
(584 letters)
>mm_chr8_43003940_43004923
Length = 984
Score = 1069 bits (553), Expect = 0.0
Identities = 553/553 (100%)
Strand = Plus / Minus
Query: 32 tgatggtcaattaaaggacatggaaaacaatcagctcagcagaggttctaaaggctaatg 91
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 984 tgatggtcaattaaaggacatggaaaacaatcagctcagcagaggttctaaaggctaatg 925
Query: 92 agccagccctacactgtgtatttgcctctcacaatccaaatgctgttaagaatgttaact 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 agccagccctacactgtgtatttgcctctcacaatccaaatgctgttaagaatgttaact 865
Query: 152 aatcccccagggattttctcagcacttaaataaaggcatccacgtatatttataagtatt 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 aatcccccagggattttctcagcacttaaataaaggcatccacgtatatttataagtatt 805
Query: 212 tgtataattaaataataattcaacaatacacacccattcataagttctaaaaccatataa 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tgtataattaaataataattcaacaatacacacccattcataagttctaaaaccatataa 745
Query: 272 aaagttaaagaacgttatagaataaaaatagtacagttgtctagaagaacaatgttttat 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 aaagttaaagaacgttatagaataaaaatagtacagttgtctagaagaacaatgttttat 685
Query: 332 aactaggctgattatttcattgaagatacatgtctgtgatgcacagcacattgtaaccca 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aactaggctgattatttcattgaagatacatgtctgtgatgcacagcacattgtaaccca 625
Query: 392 aaattcaattcctgataaactttactttctttttttttctttgtgttggcttaatttaaa 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aaattcaattcctgataaactttactttctttttttttctttgtgttggcttaatttaaa 565
Query: 452 tggtgatgtatttaaattgtgattaactgcattctagaaaacaaccattttgtaaagaag 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tggtgatgtatttaaattgtgattaactgcattctagaaaacaaccattttgtaaagaag 505
Query: 512 tgtttgttaaggaaacaaaattgcaatgactgcattattacttttataccaatttcttgt 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgtttgttaaggaaacaaaattgcaatgactgcattattacttttataccaatttcttgt 445
Query: 572 cagtgatcaaatc 584
|||||||||||||
Sbjct: 444 cagtgatcaaatc 432
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 984
Length adjustment: 10
Effective length of query: 574
Effective length of database: 974
Effective search space: 559076
Effective search space used: 559076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
