Query= MSMg01no134_f06.b1 MSMg01no134_f06.b1 CHROMAT_FILE:
MSMg01no134_f06.b1 PHD_FILE: MSMg01no134_f06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:49:37 2005
(416 letters)
>mm_chr8_104177449_104178263
Length = 815
Score = 625 bits (323), Expect = 0.0
Identities = 379/399 (94%), Gaps = 5/399 (1%)
Strand = Plus / Minus
Query: 15 ggaattc-atgcccaacacaatataagaagccacagttctgtgcacatatgtaactgtag 73
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ggaattcaatgcccaacacaatataagaagccacagttctgtgcacatatgtaactgtag 424
Query: 74 gtaggagaggggaagtgacaagtgaattatgggagttggtaggggccttactgaattata 133
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 423 gtaggagaggggaagtgacaagtgaattatgggagttggtaggggccttgctgaattata 364
Query: 134 atttaataaactaaacccagtaaacaaaaaaataacaacaacaacaacatgagcctcatt 193
|||||||||||||||| || |||||||||| | |||||||||||||||||||||| |
Sbjct: 363 atttaataaactaaacaaagcaaacaaaaaagt---aacaacaacaacatgagcctcact 307
Query: 194 gttggggagtttcatggattcaggagaaaagtagagagtat-aaaaaataacaggaaatt 252
|||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 306 gttggggagtttcatggattcaggcgaaaggtagagagtataaaaaaataacaggaaatt 247
Query: 253 tgtctagcctctggaggcacaaaagcttcagaatgcatacatacacgcaattatacatgc 312
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 246 tgtctagcctctggaggcacaaaagcttcagaatgcatacatacatgcaattatacatgc 187
Query: 313 atacatatgtacaaacacgtacaccattagcatacactcaaagtattcatacactcacac 372
||||||||||||||||| |||||||||||||||| |||||||||||||||| || || ||
Sbjct: 186 atacatatgtacaaacatgtacaccattagcatatactcaaagtattcatagacacaaac 127
Query: 373 atgcattatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 411
||||||||| |||||||||||||||||||||||||||||
Sbjct: 126 atgcattatatgtgtgtgtgtgtgtgtgtgtgtgtgtgt 88
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 815
Length adjustment: 9
Effective length of query: 407
Effective length of database: 806
Effective search space: 328042
Effective search space used: 328042
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no134_f06.g1 MSMg01no134_f06.g1 CHROMAT_FILE:
MSMg01no134_f06.g1 PHD_FILE: MSMg01no134_f06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:49:37 2005
(697 letters)
>mm_chr8_104056623_104057719
Length = 1097
Score = 1141 bits (590), Expect = 0.0
Identities = 654/698 (93%), Gaps = 38/698 (5%)
Strand = Plus / Plus
Query: 1 aaagttaaaaaaatgtgaacttaatggtaccagagaacatatttgttgccacatacccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaagttaaaaaaatgtgaacttaatggtaccagagaacatatttgttgccacatacccag 260
Query: 61 caaaggatctgacatgaaacttagaggatattaaagatatctctgagaaagagggggcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaaggatctgacatgaaacttagaggatattaaagatatctctgagaaagagggggcta 320
Query: 121 aagttaaaagcatgtggtccaggaaatgagcaaagaaaaggtccagtagcttgcttaaac 180
| |||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 321 a--------gcatttggtccaggaaatgaacaaagaaaaggtccagtagcttgcttaaac 372
Query: 181 tttgtacttttagaaaatattttctcagaaaatccaaattaattgaaggtagaggtagtt 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 373 tttgtacttttagaaaatattttctaagaaaatccaaattaattgaaggtagaggtagtt 432
Query: 241 gaaagaagacacacacacacacacacacactctcacacacacacacacacacacacacaa 300
||||||| |||||||||||||||||||||||||
Sbjct: 433 gaaagaa----------------------------cacacacacacacacacacacacaa 464
Query: 301 gatatgtgaatatgtgaccattattgtggaacctccggtgtcaagaaaataatctaaata 360
||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 465 gatatgtgaatctgtgaccattattgtggaacctccggtgtcaagaaaataatctacata 524
Query: 361 gcccctttctcagaaatatacaagttccatacagtgcagcattttgtcttcttcctatag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 gcccctttctcagaaatatacaagttccatacagtgcagcattttgtcttcttcctatag 584
Query: 421 atattttacacattgggattatttgcctttgactgtaagagtcccctggggttctcttct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 atattttacacattgggattatttgcctttgactgtaagagtcccctggggttctcttct 644
Query: 481 cttactgtttacgag-atctggtttcactcatttcataaatgataactaacacattttca 539
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 cttactgtttac-aggatctggtttcactcatttcataaatgataactaacacattttca 703
Query: 540 acttcttaggacatgtggagaaaaatgtgctgtgagccaactagaatgtattgcacttct 599
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 acttcttgggacatgtggagaaaaatgtgctgtgagccaactagaatgtattgcacttct 763
Query: 600 gtttgttctactttgttgagtctcccatccggcttagtaaagcttccataaatacaataa 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 gtttgttctactttgttgagtctcccatccggcttagtaaagcttccataaatacaataa 823
Query: 660 agcaatcaaagaaaactgttgagagccatttacttaaa 697
||||||||||||||||||||||||||||||||||||||
Sbjct: 824 agcaatcaaagaaaactgttgagagccatttacttaaa 861
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 47
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 697
Length of database: 1097
Length adjustment: 10
Effective length of query: 687
Effective length of database: 1087
Effective search space: 746769
Effective search space used: 746769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
