TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCAGGCCAAGTCCAACTCAGAGTTAAAGCAATGATAGAAAAAATAA
ACAAGACCTTGGCAGAGGGAAGCAAGGAGAGGGGGATGGGAATATAAATC
CAGTAGAAGAAATGCCAAGATAGTTTGGGAAGTGACTGTCATGACGTTCG
AGGGAAATGAAGTATGCCCACCAAACCCTCTCCTGGCCCTGCAGTGTAAG
GAGTGGGGTTTAATAAACATACATATAAGTTCTCCTTTAGACTTCCCTTA
ACCACAATTCAGAGACAGCTGTGCCCATGCAAAGAAATGCTTCCTGGAAA
GAGGTGAAGGGACCATTCCAGGAAGAGATTGGGGCCATTACTGAACAGAC
TTTCTAAGTGACAGAGGAAGGAATCAGGAACAAGAAAATGAAATTAGTCT
GGATTAGATGGAATCAGATAGTTATAACCATGTACAGCTATATGGTCTGC
CTTAAAAAAAAAGAAATGTGGGGAGAGAGTAGGAAGCCTGGCGTCCAGCA
GTAGTTCAAGTAAAAGCTAACATGGACCATCTGACAGACACAACCACTAG
CACATGCAGAACTAAGTAAAAGAAGAGGCATTTCTCATTTGCACATGGAT
GGAGTCAGCCAAACTTTCCTTCCCTCTTAAATTTCCTGCAGCCATTAAGC
CACTGCCTCTGATGGGGATTTTCCCCCAGATGAAGTAGTTGGATCAACTG

ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXCACCGGAAGACCAACAGAGTCAACTAACCTAGAC
TCTTGGGGGCTCTCAGAAACTGAACCATGAACCAAAGAACATATGCGAGC
TAGACCCAGGCCTCCCTGCACAAATGTAGCAGATGTGCAGCTTGGTCTTC
ATCTGGGTCCTGAACGCTGGGAGCAGGGGCTTTCCCTAAAGCTGTTGCCT
GCCCATGAGATATGTTTTTCTAATTGAGCTTCCTTGTCTGGCCTCAATGG
GGAGGATATGCCTAGCCTCACCGAGATTTGATGTGCCAAGGTGGGGAAAT
ACCCTAGGGGGACCTACCTGATCAGAGGAGAAAGGGAAGGGGGGAAGGGG
GAAAGTNTCTTGCCNNNNNNNTTNNTNNTNNTTTTTTTTTTTTTTTTTTT
TTTTTTTTNTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTNTTTTTTT
TTTTTTTNTTTTNTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTN
TTTTNTTTNTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTNTTTTT
TTTTTTTAATCGTTTNTTTTTTTTTTTTNTTCGTTTTTNTTTTTTNTTTC
GTTTNCTTCCTTTNTCCTTCCCTTCGCTTCTTTCCTTTTCCTTCTCCCTT
CTCTCCTTCTTCTCCCTTCTTTCGTCTTTTCCGTT

Query= MSMg01no135_j07.b1 MSMg01no135_j07.b1 CHROMAT_FILE:
MSMg01no135_j07.b1 PHD_FILE: MSMg01no135_j07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:44 2005
         (700 letters)



>mm_chr8_85507218_85508317
          Length = 1100

 Score = 1340 bits (693), Expect = 0.0
 Identities = 696/697 (99%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattccaggccaagtccaactcagagttaaagcaatgatagaaaaaataaacaagacc 63
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccaggccaagtcaaactcagagttaaagcaatgatagaaaaaataaacaagacc 263

                                                                       
Query: 64  ttggcagagggaagcaaggagagggggatgggaatataaatccagtagaagaaatgccaa 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttggcagagggaagcaaggagagggggatgggaatataaatccagtagaagaaatgccaa 323

                                                                       
Query: 124 gatagtttgggaagtgactgtcatgacgttcgagggaaatgaagtatgcccaccaaaccc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gatagtttgggaagtgactgtcatgacgttcgagggaaatgaagtatgcccaccaaaccc 383

                                                                       
Query: 184 tctcctggccctgcagtgtaaggagtggggtttaataaacatacatataagttctccttt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tctcctggccctgcagtgtaaggagtggggtttaataaacatacatataagttctccttt 443

                                                                       
Query: 244 agacttcccttaaccacaattcagagacagctgtgcccatgcaaagaaatgcttcctgga 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 agacttcccttaaccacaattcagagacagctgtgcccatgcaaagaaatgcttcctgga 503

                                                                       
Query: 304 aagaggtgaagggaccattccaggaagagattggggccattactgaacagactttctaag 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aagaggtgaagggaccattccaggaagagattggggccattactgaacagactttctaag 563

                                                                       
Query: 364 tgacagaggaaggaatcaggaacaagaaaatgaaattagtctggattagatggaatcaga 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgacagaggaaggaatcaggaacaagaaaatgaaattagtctggattagatggaatcaga 623

                                                                       
Query: 424 tagttataaccatgtacagctatatggtctgccttaaaaaaaaagaaatgtggggagaga 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tagttataaccatgtacagctatatggtctgccttaaaaaaaaagaaatgtggggagaga 683

                                                                       
Query: 484 gtaggaagcctggcgtccagcagtagttcaagtaaaagctaacatggaccatctgacaga 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gtaggaagcctggcgtccagcagtagttcaagtaaaagctaacatggaccatctgacaga 743

                                                                       
Query: 544 cacaaccactagcacatgcagaactaagtaaaagaagaggcatttctcatttgcacatgg 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 cacaaccactagcacatgcagaactaagtaaaagaagaggcatttctcatttgcacatgg 803

                                                                       
Query: 604 atggagtcagccaaactttccttccctcttaaatttcctgcagccattaagccactgcct 663
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 atggagtcagccaaactttccttccctcttaaatttcctgcagccattaagccactgcct 863

                                                
Query: 664 ctgatggggattttcccccagatgaagtagttggatc 700
           |||||||||||||||||||||||||||||||||||||
Sbjct: 864 ctgatggggattttcccccagatgaagtagttggatc 900


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 700
Length of database: 1100
Length adjustment: 10
Effective length of query: 690
Effective length of database: 1090
Effective search space:   752100
Effective search space used:   752100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)