Query= MSMg01no135_j23.b1 MSMg01no135_j23.b1 CHROMAT_FILE:
MSMg01no135_j23.b1 PHD_FILE: MSMg01no135_j23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:47 2005
(441 letters)
>mm_chr8_101258375_101259215
Length = 841
Score = 826 bits (427), Expect = 0.0
Identities = 433/435 (99%)
Strand = Plus / Plus
Query: 5 gaattccaagcaatttacattatacctttcctttaccctctccctttccttctctatttc 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaagcaatttagattatacctttcctttaccctctccctttccttctctatttc 264
Query: 65 tccctctcccactttttctccatccaacacctctcctttgcatgtttgtgtatttgagga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tccctctcccactttttctccatccaacacctctcctttgcatgtttgtgtatttgagga 324
Query: 125 taaaatattcagctacagaaatgacagtctcatgattttgatgtgagtgatccttctagt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 taaaatattcagctacagaaatgacagtctcatgattttgatgtgagtgatccttctagt 384
Query: 185 gacatatggagtggatacaccatgataagaaagaaatatggaaagtctttataaaggatg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gacatatggagtggatacaccatgataagaaagaaatatggaaagtctttataaaggatg 444
Query: 245 aaaaggcgaagcgtcgcgattcagtcaggagcctcagtaaggagggagagaaacagtgaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaaaggcgaagcgtcgcgattcagtcaggagcctcagtaaggagggagagaaacagtgaa 504
Query: 305 actagatgagaacacaatcttttctaaaggacatggttggccaaatatcaagctctaacc 364
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 505 actagatgagaacacaatcttttctaaaggacatggttggccaaatgtcaagctctaacc 564
Query: 365 ctcaatatattgatcaacaccattcagcacactcctaagactacttctaaggtaatatct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctcaatatattgatcaacaccattcagcacactcctaagactacttctaaggtaatatct 624
Query: 425 ggggggagggtgttg 439
|||||||||||||||
Sbjct: 625 ggggggagggtgttg 639
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space: 359424
Effective search space used: 359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no135_j23.g1 MSMg01no135_j23.g1 CHROMAT_FILE:
MSMg01no135_j23.g1 PHD_FILE: MSMg01no135_j23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:47 2005
(647 letters)
>mm_chr8_101353274_101354319
Length = 1046
Score = 1226 bits (634), Expect = 0.0
Identities = 644/648 (99%), Gaps = 3/648 (0%)
Strand = Plus / Minus
Query: 1 ctgatttgaaatggttatcaatgaataattctttaaaatgttgatggggcgggggcgggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 846 ctgatttgaaatggttatcaatgaataattctttaaaatgttgatggggcgggggcgggg 787
Query: 61 gg-gacacaggaaatatatatatatttttttgtggttttcccctatcagattttgaagtt 119
|| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 ggagacacaggaa--atatatatatttttttgtggttttcccctatcagattttgaagtt 729
Query: 120 atttcttaggaaaattctgggatacttccactaatttgctgtctatagtccatttttttt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 atttcttaggaaaattctgggatacttccactaatttgctgtctatagtccatttttttt 669
Query: 180 tctgttttgattttttttcttttttctctcacaagtagagcagcaagccagaagatacaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 tctgttttgattttttttcttttttctctcacaagtagagcagcaagccagaagatacaa 609
Query: 240 ctaaaagacccttctcaaatcaaataggatatagtagaaataaatgaccttttctttcag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 ctaaaagacccttctcaaatcaaataggatatagtagaaataaatgaccttttctttcag 549
Query: 300 acagatacaagctgtcagccccaaatgttacattttctgtgaacttgtttctgaagctac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 acagatacaagctgtcagccccaaatgttacattttctgtgaacttgtttctgaagctac 489
Query: 360 actcaagagtgtgacttttgagagaggcaggattctagcaggagtgggaggtgctgaggg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 actcaagagtgtgacttttgagagaggcaggattctagcaggagtgggaggtgctgaggg 429
Query: 420 ttaaatttaccgtaggacatgaaagatgctaaccagcttctcaacagctgagacatagca 479
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 428 ttaaatttaccgtaggacatgaaagatgctaaccagcttctcaacagccgagacatagca 369
Query: 480 gcttcttttatgcacttaaattacaagcatagaaaagcaatgcccggcgggatatatcaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 gcttcttttatgcacttaaattacaagcatagaaaagcaatgcccggcgggatatatcaa 309
Query: 540 taccaaaccagacttagagcttgtgattcagcccttggtgtttatgccttctgacacaga 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 taccaaaccagacttagagcttgtgattcagcccttggtgtttatgccttctgacacaga 249
Query: 600 gcgacattcaagaatgtgcttgttcccacttgagatttactgatgagg 647
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 gcgacattcaagaatgtgcttgttcccacttgagatttactgatgagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1046
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1036
Effective search space: 659932
Effective search space used: 659932
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
