Query= MSMg01no135_m21.b1 MSMg01no135_m21.b1 CHROMAT_FILE:
MSMg01no135_m21.b1 PHD_FILE: MSMg01no135_m21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:00 2005
(655 letters)
>mm_chr8_119819214_119820268
Length = 1055
Score = 1207 bits (624), Expect = 0.0
Identities = 624/624 (100%)
Strand = Plus / Minus
Query: 32 tgctttcttatcaaacccaggacctccagcccagaaatgattccaatcacaatgggctgc 91
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1055 tgctttcttatcaaacccaggacctccagcccagaaatgattccaatcacaatgggctgc 996
Query: 92 ctctgccttcatccatccctaagaaaacgtcctgtatgcttgcctgaagcctgattttat 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 995 ctctgccttcatccatccctaagaaaacgtcctgtatgcttgcctgaagcctgattttat 936
Query: 152 gaaggcattttcttaattgagtctccttcctcactgatgactctagcttgtgtcaagctg 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 935 gaaggcattttcttaattgagtctccttcctcactgatgactctagcttgtgtcaagctg 876
Query: 212 acacaaaactagacaggacaatcttttttgcacactcaagtttatttgcttgaaagataa 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 acacaaaactagacaggacaatcttttttgcacactcaagtttatttgcttgaaagataa 816
Query: 272 gaaatcagctaataaataaaccatctttcctaagacgttctaagaggaaccaccagtcct 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 gaaatcagctaataaataaaccatctttcctaagacgttctaagaggaaccaccagtcct 756
Query: 332 taggctacacctgaaactgaaccaggttaggctggctctggtcaaccctggagccagtca 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 taggctacacctgaaactgaaccaggttaggctggctctggtcaaccctggagccagtca 696
Query: 392 gcactggggcagggacttggccacctggggtttggtttcctgttggatgtcccatgtggg 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 gcactggggcagggacttggccacctggggtttggtttcctgttggatgtcccatgtggg 636
Query: 452 ggtaggggtgtcaaaatgccatgttcttggtgtgtgccactcatagaaacgttaccacca 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 ggtaggggtgtcaaaatgccatgttcttggtgtgtgccactcatagaaacgttaccacca 576
Query: 512 ttatcctaacaccctgtctcagtttcccagtgtgtaacaagtaattgaacatcagctaca 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 ttatcctaacaccctgtctcagtttcccagtgtgtaacaagtaattgaacatcagctaca 516
Query: 572 ggggctccaaggccaccatcttcagtcgttctttgtaggatccataccaagtaccaagcc 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 ggggctccaaggccaccatcttcagtcgttctttgtaggatccataccaagtaccaagcc 456
Query: 632 tgcctgctgccagtgagcagtaga 655
||||||||||||||||||||||||
Sbjct: 455 tgcctgctgccagtgagcagtaga 432
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space: 674025
Effective search space used: 674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no135_m21.g1 MSMg01no135_m21.g1 CHROMAT_FILE:
MSMg01no135_m21.g1 PHD_FILE: MSMg01no135_m21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:00 2005
(632 letters)
>mm_chr8_119642973_119644005
Length = 1033
Score = 1216 bits (629), Expect = 0.0
Identities = 632/633 (99%), Gaps = 1/633 (0%)
Strand = Plus / Plus
Query: 1 agatgatgaccctacaggccttaagcccgggaaacagtcctctgcagtccaggggacctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agatgatgaccctacaggccttaagcccgggaaacagtcctctgcagtccaggggacctt 260
Query: 61 ttcccaccctcatttctgagctctgcagtacagggattcagtctaactcagggagcagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcccaccctcatttctgagctctgcagtacagggattcagtctaactcagggagcagga 320
Query: 121 gagccaggcttgtgacgctcttgtctccataacacttctctatgtgtctctgctgtggct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagccaggcttgtgacgctcttgtctccataacacttctctatgtgtctctgctgtggct 380
Query: 181 tagcccacatcttacatcacccggatttcacatctgtaacattgttgttgtctctgttgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagcccacatcttacatcacccggatttcacatctgtaacattgttgttgtctctgttgt 440
Query: 241 tgttttaagtcacgtgaaaggggttgtgacctttgccaggggaaagcagcactccccccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgttttaagtcacgtgaaaggggttgtgacctttgccaggggaaagcagcactccccccc 500
Query: 301 cccccccc-tgtcccatgcaggagagaccacagtgaaagagacccgagagcccagcagag 359
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccccccccctgtcccatgcaggagagaccacagtgaaagagacccgagagcccagcagag 560
Query: 360 ttctgcttgctccagctagggccgcctcttcccaaggtctgactttgcaaaatgaattta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttctgcttgctccagctagggccgcctcttcccaaggtctgactttgcaaaatgaattta 620
Query: 420 gtgttgggggttgtcctagtgagggtttctattgctgtgatgaaacaccgtggccaaaag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtgttgggggttgtcctagtgagggtttctattgctgtgatgaaacaccgtggccaaaag 680
Query: 480 caacttagggaggaaagggtttattctgcttatgtgtccacatcatagtccatcatttga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 caacttagggaggaaagggtttattctgcttatgtgtccacatcatagtccatcatttga 740
Query: 540 aagaagccagggcaggaactcaagcagggcaggaacctggaggcagaaactgatgcagag 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aagaagccagggcaggaactcaagcagggcaggaacctggaggcagaaactgatgcagag 800
Query: 600 gccatggaggtaccacttactggtactacttgg 632
|||||||||||||||||||||||||||||||||
Sbjct: 801 gccatggaggtaccacttactggtactacttgg 833
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1033
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1023
Effective search space: 636306
Effective search space used: 636306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
