CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCATTGAAATCCGGAGAATGGTAAATATTCAGAAAGACACATTTTTT
AAAGTTATAAAAAGTCCATTAATTTTAACAACATATTTTATCACATAGTC
ATATCCCCATCAGATAATTACAGCATTTACCCAGTGTATAAACTATCTTA
TTTTACCTCTACTTTGTTTTAATGTTCTGTTTTAGGCTCAGTGTATATTT
CATACTTAAGTCACAGTTGAGAGCAGCCATACTTTTACTAGCTAAGTAGC
CACAAGTAGACAAGGAAGAATAATCAGAAGACCATAAACCTTTTCATAGA
GGAGGGTGATCAAAGACTTTCTGGTGATAACAATCCTCTGAGTGAAGAAC
TAGTGAATTAAGACTGCTGCCGTTAGTTAGTTAGTTAGTTAGTTAGTTAG
ACAACTATTTATTTGGGAAAACATTCAGATGGCCTTTGAAATCAGCAGAT
CCTAAAGGAGACACTGGGAAGGTAGATGGAGGGAAAGATGCTCATGTTCT
TAGCCTCAGTAGAAGGGCTGGATTGGGAACAAGATCTATCTTTTAAAAAC
TTTGAATGTGTGAAATCACTGACAGTCCCAAAATTCTTCCACTAGCACAA
TGAATAAGTGAAACCATGATGAAATGAAACCATGTCTGCTTCAGGCTGGG
AGATTATGCTACACTG

GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXAAAATTCAGGTCATAAAGACAGGAGAGGACACATTTTG
TCCTTTCTTTTTATGTCTTTCCATTTTGTAGAGAATGATGATGTGAGGTA
GCAAAGAGCAGAAGATAAAAGCATAACAATAAGCAGGTCCCCATCAAAGA
TTTCTAGATACTCTGGGCCTTTTACTCATCATGCAGAATGGAAGCAGAGG
TTGCTAAATATCAGATAGTGTCCTTAGTGATGAAGTTGGTCTGAATACAG
AAACATTTTGGGGACTATAAATCAAGATTCTGACATTAGCAGACAGGTGA
TAAAATGAATAAAATCAGTGAAACTTTAAATCAAACGTAACATTGCCAAT
TTTCCTTATAGGTGCGAGGAAATAAACCACCTATTTTCCGTACCTTTCCT
CGGAAGCATAGAATTCATGTGCTTGAGGCTCCTGGTGACATTGAGCCAAC
TCATTCCACCTGTGCTGCTGACAGCAGGGCTCCTGCTGATGCTGAGCCAA
ATTCTTCCACCTGTGCTGCTGTCAATGGGGCTCCTGCTGGTGTTGAGCCA
ACTACTTCTTCCCAGTGTGCTCCTGACTGTGAGGATCCTGCAGTCATTGA
GCCAACTCATTCCACCTGTGCTGCTGACAGCAGGGCTCCTGCTGATGCTG
AGCCAAATTCTTTCACCTGTGCTGGTG

Query= MSMg01no135_n17.b1 MSMg01no135_n17.b1 CHROMAT_FILE:
MSMg01no135_n17.b1 PHD_FILE: MSMg01no135_n17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:04 2005
         (647 letters)



>mm_chr8_105211641_105212688
          Length = 1048

 Score =  955 bits (494), Expect = 0.0
 Identities = 609/654 (93%), Gaps = 16/654 (2%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcattgaaatccggagaatggtaaatattcagaaagacacattttttaaagttata 64
           ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 192 gaattcattgaaatctggagaatggtaaatattcagaaagacacatttttaaaagttata 251

                                                                       
Query: 65  aaaagtccattaattttaacaacatattttatcacatagtcatatccccatcagataatt 124
           |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 252 aaaagtccattaattttaaccatatattttatcacatagtcatatccccatcagataatt 311

                                                                       
Query: 125 acagcatttacccagtgtataaactatcttattttacctctactttgttttaatgttctg 184
           |||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 312 acagcatttacccagtatataagctatcttattttacttctactttgttttaatgttctg 371

                                                                       
Query: 185 ttttaggctcagtgtatatttcatacttaagtcacagttgagagcagccatacttttact 244
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| 
Sbjct: 372 ttttaggctcagtgtatatttcatactgaagtcacagttgagagcagccatacttttaca 431

                                                                       
Query: 245 agctaagtagccacaagtagacaaggaagaataatcagaagaccataaaccttttcatag 304
           |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 432 agctaagtagccacaagtagtcagggaagaataatcagaagaccataaaccttttcatag 491

                                                                       
Query: 305 aggagggtgatcaaagactttctggtgataacaatcctctgagtga-agaactagtgaat 363
           |||||||||||||||||||||||||||||| ||||||||||||| | ||||||| |||| 
Sbjct: 492 aggagggtgatcaaagactttctggtgatagcaatcctctgagttagagaactaatgaaa 551

                                                                       
Query: 364 taagactgctg-cc-----------gttagttagttagttagttagttagttagacaact 411
           ||||||||||| ||           |||||||||||||||||||||||||||||||||||
Sbjct: 552 taagactgctgtccttagttagttagttagttagttagttagttagttagttagacaact 611

                                                                       
Query: 412 atttatttgggaaaacattcagatggcctt-tgaaatcagcagatcctaaaggagacact 470
           ||||||||| |||||||||||||||||||| |||| |||||||| || ||||||||||||
Sbjct: 612 atttatttgagaaaacattcagatggccttctgaactcagcagacccaaaaggagacact 671

                                                                       
Query: 471 gggaaggtagatggagggaaagatgctcatgttcttagcctcagtagaagggctggattg 530
           ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 672 gggaaagtagatggagggaaagatgctcatgtccttagcctcagtagaagggctggattg 731

                                                                       
Query: 531 ggaacaagatctatcttttaaaaactttgaatgtgtgaaatcactgacagtcccaaaatt 590
           |||||||||||||| ||||||||||||||||||||||||||||| || ||||||| ||||
Sbjct: 732 ggaacaagatctatgttttaaaaactttgaatgtgtgaaatcacagaaagtcccagaatt 791

                                                                 
Query: 591 cttccactagcacaatgaat-aagtgaaaccatgatgaaatgaaaccatgtctg 643
           ||||| |||| | ||||||| || ||||||||||||||||||||| ||||||||
Sbjct: 792 cttccgctagtagaatgaatgaa-tgaaaccatgatgaaatgaaatcatgtctg 844


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1048
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1038
Effective search space:   661206
Effective search space used:   661206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)