Query= MSMg01no136_e06.b1 MSMg01no136_e06.b1 CHROMAT_FILE:
MSMg01no136_e06.b1 PHD_FILE: MSMg01no136_e06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:35 2005
(216 letters)
>mm_chr8_89563486_89564101
Length = 616
Score = 366 bits (189), Expect = e-106
Identities = 208/215 (96%), Gaps = 2/215 (0%)
Strand = Plus / Plus
Query: 4 ggaattctgtgctct--ccccatccatgtgtggttttttgagacattagcctggaactca 61
||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 202 ggaattctgtgctctacccccatccatatgtggttttttgagacattagcctggaactca 261
Query: 62 cgacccctctgccttcacctccaaaatgtttagattacatgtactactactctgactcta 121
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 cgacccttctgccttcacctccaaaatgtttagattacatgtactactactctgactcta 321
Query: 122 aagtcatacctattttttttaagtttattttattaggtatattggtgttttgcagtagtg 181
||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 322 aagtcatacctatttttttaaagtttattttattagatatattggtgttttgcagtagtg 381
Query: 182 tatgtctgtgtgccatgtgtagagtcctcggaggg 216
||||||||||||||||||||||||||||| |||||
Sbjct: 382 tatgtctgtgtgccatgtgtagagtcctcagaggg 416
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 216
Length of database: 616
Length adjustment: 9
Effective length of query: 207
Effective length of database: 607
Effective search space: 125649
Effective search space used: 125649
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no136_e06.g1 MSMg01no136_e06.g1 CHROMAT_FILE:
MSMg01no136_e06.g1 PHD_FILE: MSMg01no136_e06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:35 2005
(342 letters)
>mm_chr8_89701218_89701959
Length = 742
Score = 646 bits (334), Expect = 0.0
Identities = 340/342 (99%)
Strand = Plus / Minus
Query: 1 ctgagaaacatccagactagtacctggcaacggaacgctgaaaaaacatcaactactata 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ctgagaaacagccagactagtacctggcaacggaacgctgaaaaaacatcaactactata 483
Query: 61 aaacccatgaggaatgcatgctcctacaggccagatgggttgcagaaaactttgatgcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 aaacccatgaggaatgcatgctcctacaggccagatgggttgcagaaaactttgatgcag 423
Query: 121 gcactgaatattacaaggggaatttgggagctaatgtcatatgagagagtacgtggctga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gcactgaatattacaaggggaatttgggagctaatgtcatatgagagagtacgtggctga 363
Query: 181 ccaatttatttgagtgcaatttaaagagaaaagccactatgcaagtgaacacatccatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ccaatttatttgagtgcaatttaaagagaaaagccactatgcaagtgaacacatccatgg 303
Query: 241 acctgccgatcgccttcaggagaaagctgggctacttggctcagtgaggactgaagctgt 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gcctgccgatcgccttcaggagaaagctgggctacttggctcagtgaggactgaagctgt 243
Query: 301 acttgcagcagatttacccttgcccagttgggtatggacaga 342
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 acttgcagcagatttacccttgcccagttgggtatggacaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
