Query= MSMg01no137_m14.b1 MSMg01no137_m14.b1 CHROMAT_FILE:
MSMg01no137_m14.b1 PHD_FILE: MSMg01no137_m14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:36 2005
(584 letters)
>mm_chr8_75874845_75875829
Length = 985
Score = 1058 bits (547), Expect = 0.0
Identities = 575/589 (97%), Gaps = 8/589 (1%)
Strand = Plus / Minus
Query: 4 gaattctgaatctgtccattttgtcactcagtccattaaaatgatatcccgagggagcaa 63
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 gaattctgaatctgtgaattttgtcactcagtccattaaaatgatatcccgagggagcaa 585
Query: 64 aagagcagcttacattttctgtgaatgtcacaggaagtttactgagtcttatgtaagtgt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 aagagcagcttacattttctgtgaatgtcacaggaagtttactgagtcttatgtaagtgt 525
Query: 124 ctcaaaagagaactcatactctttcttcctttagggcgacagagggaggttggagggagt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 ctcaaaagagaactcatactctttcttcctttagggcgacagagggaggttggagggagt 465
Query: 184 ggcacgccaccctttctgacacaggcgggcacccaaagtgctttcttatgagtggaggca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 ggcacgccaccctttctgacacaggcgggcacccaaagtgctttcttatgagtggaggca 405
Query: 244 ggcatctgaggctgatgtttctttttgcctctcctgccttcccacctcaggattcacttt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 ggcatctgaggctgatgtttctttttgcctctcctgccttcccacctcaggattcacttt 345
Query: 304 gatagactccagattgggaatgatataaattaggaaaagaacagtggtgatttcttttct 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 gatagactccagattgggaatgatataaattaggaaaagaacagtggtgatttcttttct 285
Query: 364 cgtctctcacaaatggttgatatgaatcaattactcatctgtgtgttgggaccttactgg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 cgtctctcacaaatggttgatatgaatcaattactcatctgtgtgttgggaccttactgg 225
Query: 424 ggcag--------aaaaaaaaaaaaaaagcagactaagagaaaacttccatgaaggtttc 475
|||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 agcaggaaaaaaaaaaaaaaaaaaaaaagcagactaagagaaaacttccatgaaggtttc 165
Query: 476 acacatctcttgggtattttcaaagagtgctttaccttattgaaaattgcttgaggagaa 535
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 164 acacatctcttgggtattttcaaagagtgcttttccttattgaaaattgcttgaggagaa 105
Query: 536 cgcacatttatggagctggggcctgttaatttcaaaacggaaagtgaac 584
||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 104 cgcacatttatggagctggggtctgttaatttcagaacggaaagtgaac 56
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 985
Length adjustment: 10
Effective length of query: 574
Effective length of database: 975
Effective search space: 559650
Effective search space used: 559650
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no137_m14.g1 MSMg01no137_m14.g1 CHROMAT_FILE:
MSMg01no137_m14.g1 PHD_FILE: MSMg01no137_m14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:36 2005
(547 letters)
>mm_chr8_75740700_75741646
Length = 947
Score = 1033 bits (534), Expect = 0.0
Identities = 543/546 (99%)
Strand = Plus / Plus
Query: 1 cacccatcttgtctctgccatacaaaaagcaaagcataagactgatctgcatttagcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacccatcttgtctctgccatacaaaaagcaaagcataagactgatctgcatttagcaaa 260
Query: 61 agctttcacaaggcacaggagtctagaggtgtggttcaagtgctagcttgcacctgatag 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 agctttcacaaggcacaggagtctagaggtgtggttcaagtgctggcttgcacctgatag 320
Query: 121 ctaccctggcaaagccattaagatatcctgtgccctcagcagtttgatgtgagagtccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctaccctggcaaagccattaagatatcctgtgccctcagcagtttgatgtgagagtccat 380
Query: 181 ggcaattcaagtgcagctaaaatgatccagggggagaaccaatgaactaaaaaatacact 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggcaattcaagtgcagctaaaaggatccagggggagaaccaatgaactaaaaaatacact 440
Query: 241 gaaggggaaataatgtgagacactgagggattaagattaaaattgattggttgtatttta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaggggaaataatgtgagacactgagggattaagattaaaattgattggttgtatttta 500
Query: 301 accacttacacaaacaaattctagagctagaaagaaatgaatgacttcttgctctgatag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 accacttacacaaacaaattctagagctagaaagaaatgaatgacttcttgctctgatag 560
Query: 361 ctgtgaatcaggagggaataaacaacatgagttgtgggctgtacagctgcctcctggcaa 420
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgtgaatcaggagggaataaacaatatgagttgtgggctgtacagctgcctcctggcaa 620
Query: 421 cttcttagtagagggaaaattactaaagtggaaaaaatgttatttcacctggagaagaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cttcttagtagagggaaaattactaaagtggaaaaaatgttatttcacctggagaagaga 680
Query: 481 agtagaaacccctctgaattcatcatttgtatgttactactctctataaaccaactatac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agtagaaacccctctgaattcatcatttgtatgttactactctctataaaccaactatac 740
Query: 541 tcattg 546
||||||
Sbjct: 741 tcattg 746
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space: 503169
Effective search space used: 503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
