Query= MSMg01no138_b08.b1 MSMg01no138_b08.b1 CHROMAT_FILE:
MSMg01no138_b08.b1 PHD_FILE: MSMg01no138_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:00 2005
(451 letters)
>mm_chr8_15333283_15334133
Length = 851
Score = 857 bits (443), Expect = 0.0
Identities = 446/447 (99%)
Strand = Plus / Plus
Query: 5 gaattcttagtaggatcacaaaaacgtttcatttctcccaatttacttgatcatttgctt 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttagtaggattacaaaaacgtttcatttctcccaatttacttgatcatttgctt 264
Query: 65 gcccttttttaatgctacagatcttcataagctaacttcatctcctacctttaatatata 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gcccttttttaatgctacagatcttcataagctaacttcatctcctacctttaatatata 324
Query: 125 attttgtcctactcttgaggcaaatttaagacattttattttaatatagctgttaaaccc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 attttgtcctactcttgaggcaaatttaagacattttattttaatatagctgttaaaccc 384
Query: 185 acacatatttgtggataaatgtactaagaatctccaaatatagatttgtttgtttggatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acacatatttgtggataaatgtactaagaatctccaaatatagatttgtttgtttggatt 444
Query: 245 acttcttgatttgcgttataattattatctgcatttaaaaattcattatacattccttta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acttcttgatttgcgttataattattatctgcatttaaaaattcattatacattccttta 504
Query: 305 aaacatcatctttgcctatgtttttaaaaattattctggtgttttgaaagaattatattt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaacatcatctttgcctatgtttttaaaaattattctggtgttttgaaagaattatattt 564
Query: 365 ttgtcctagtagtcaatgaaggtttatccagttttaatattcatgttcttctattccctt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttgtcctagtagtcaatgaaggtttatccagttttaatattcatgttcttctattccctt 624
Query: 425 acctaattactgtctagtatcagtttt 451
|||||||||||||||||||||||||||
Sbjct: 625 acctaattactgtctagtatcagtttt 651
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space: 370881
Effective search space used: 370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no138_b08.g1 MSMg01no138_b08.g1 CHROMAT_FILE:
MSMg01no138_b08.g1 PHD_FILE: MSMg01no138_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:00 2005
(597 letters)
>mm_chr8_15475770_15476766
Length = 997
Score = 1062 bits (549), Expect = 0.0
Identities = 586/599 (97%), Gaps = 4/599 (0%)
Strand = Plus / Minus
Query: 1 cgaatgtgaggagcctcaaatcactaggaaattgttacagagtaaaattcagatgatagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 cgaatgtgaggagcctcaaatcactaggaaattgttacagagtaaaattcagatgatagg 738
Query: 61 atggtctctttctacatacaatgcgcacttcttgcatatggaactaaaatgtgattaaca 120
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 737 atggtctctttctacatacaatgcgcacttcttgcatatggaactaaagtgtgattaata 678
Query: 121 ataaccacaacttgatgcataagggctggggcgttcagtattctaagcatcacttcagat 180
|||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||
Sbjct: 677 ataaccacaacttgatgcataagggctgggccattcagtattgtaagcatcacttcagat 618
Query: 181 tgggctaatagtgaaacagaagcatggaggccaacttgcccacagaagatagtaatacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tgggctaatagtgaaacagaagcatggaggccaacttgcccacagaagatagtaatacat 558
Query: 241 tgacttcggctaactcttgggcacagaaggacaagcaaaccccttcctgactatggacac 300
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 557 tgacttctgctaactcttgggcacagaaggacaagcaaaccccttcctgactatggacgc 498
Query: 301 cattgttttcatcatctgaaaacaggagtcgatggcac-c-cactcagaaaatggatgga 358
|||||||||||||||||||||||||||||||||| || | |||||||||||||||||||
Sbjct: 497 cattgttttcatcatctgaaaacaggagtcgatg--acgcgcactcagaaaatggatgga 440
Query: 359 tattgcagctcagtgagagttgtcctcattaaaactgagtttatcttctctctagaatgt 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tattgcagctcagtgagagttgtcctcattaaaactgagtttatcttctctctagaatgt 380
Query: 419 tccatggtgctctgacttcttgttggtctgcatgtgtggaacccgtgcatatatgcagag 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tccatggtgctctgacttcttgttggtctgcatgtgtggaacccgtgcatatatgcagag 320
Query: 479 ggtagaggctgactggtaccttccctgaactcttcctaccttatatctgagtctctcaca 538
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ggtagaggctgcctggtaccttccctgaactcttcctaccttatatctgagtctctcaca 260
Query: 539 aaccctgctgtttaaacaatatcaattaaacagtgagctctaaagatctgctggcctct 597
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 259 aaccctgctgtttaaacaatatcaattaaacagtgagctctaaggatctgctggcctct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 997
Length adjustment: 10
Effective length of query: 587
Effective length of database: 987
Effective search space: 579369
Effective search space used: 579369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
