Query= MSMg01no142_m02.b1 MSMg01no142_m02.b1 CHROMAT_FILE:
MSMg01no142_m02.b1 PHD_FILE: MSMg01no142_m02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:02:51 2005
(217 letters)
>mm_chr8_28242929_28243545
Length = 617
Score = 375 bits (194), Expect = e-108
Identities = 209/214 (97%), Gaps = 1/214 (0%)
Strand = Plus / Minus
Query: 1 gaggccctgttgctctcagattcctaaactctggtagctctcaatatttccctcattttc 60
|||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 320 gaggccctgttgctctcagattcctaaattctggtagctctcaatatttaattcattttc 261
Query: 61 cccccatttttccagatacaaccgattctaaaatttccaagcttttcattgatactattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cccccatttttccagatacaaccgattctaaaatttccaagcttttcattgatactattt 201
Query: 121 ccaagcccagtggtacacatttctaatcctaccttttaaggtaggctcaggaggattatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ccaagcccagtggtacacatttctaatcctaccttttaaggtaggctcaggaggattatt 141
Query: 181 tgagcccaggagggttggttttgtttt-ggtttt 213
||||||||||||||||||||||||||| ||||||
Sbjct: 140 tgagcccaggagggttggttttgtttttggtttt 107
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 217
Length of database: 617
Length adjustment: 9
Effective length of query: 208
Effective length of database: 608
Effective search space: 126464
Effective search space used: 126464
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no142_m02.g1 MSMg01no142_m02.g1 CHROMAT_FILE:
MSMg01no142_m02.g1 PHD_FILE: MSMg01no142_m02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:02:51 2005
(597 letters)
>mm_chr8_28168822_28169818
Length = 997
Score = 1087 bits (562), Expect = 0.0
Identities = 586/594 (98%)
Strand = Plus / Plus
Query: 1 ttgggcgactctggagatgccgcgccagcacagggcgcaatttgggtacccaggtgctcc 60
|||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 201 ttgggcgactctggagatgccgcgccagcagagggcgcaatttgggtacggaggtgctcc 260
Query: 61 tcaacacttaatgagctaggctaccccagtgccagttgcaggctagagttgcccctttcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaacacttaatgagctaggctaccccagtgccagttgcaggctagagttgcccctttcg 320
Query: 121 acatccaacagtgcccctgctctgcagcctcggagctcagctcgactgagctgccaattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acatccaacagtgcccctgctctgcagcctcggagctcagctcgactgagctgccaattt 380
Query: 181 ccaaaataaaatcaacgtgtgaccttattcagcagatgtaccaaagaaacaggcgcagag 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 381 ccaaaataaaatcaacgtgtgaccttattcagcagatgtaccaaagaaacaggcacagag 440
Query: 241 cggggccgatttttgaagccaaaaagggaagatgaaaaaagagagcgagagaggggaggg 300
|||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 441 cgggcccgatttttgaagccaaaaagggaagatgagaaaagagagcgagagaggggaggg 500
Query: 301 gaaagaaacttggctggacatgaaaggtgtcttgtccgtctgttccccattaggcgcgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaaagaaacttggctggacatgaaaggtgtcttgtccgtctgttccccattaggcgcgat 560
Query: 361 tctctcgcaatctgcagcctcaacataattctcttgaccagaaactctcccgagagagat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tctctcgcaatctgcagcctcaacataattctcttgaccagaaactctcccgagagagat 620
Query: 421 agtgtcggagggaaaacaaacaaacaaacaaacaaacagcagcggcgcacatcttctgcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agtgtcggagggaaaacaaacaaacaaacaaacaaacagcagcggcgcacatcttctgcc 680
Query: 481 ggcaaagtcacataaaaacctatttggagccgggcggtggtgcacgcctttaatcccagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggcaaagtcacataaaaacctatttggagccgggcggtggtgcacgcctttaatcccagc 740
Query: 541 atttgggaggcagaggcaggtggatttctgagttcgaggccagcctggactaca 594
|||||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 741 atttgggaggcagaggcaggtgaatttctgagttcgaggccagcctgggctaca 794
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 997
Length adjustment: 10
Effective length of query: 587
Effective length of database: 987
Effective search space: 579369
Effective search space used: 579369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
