NNTTCATAATTTGCGGCGCTAAACGACTCCTATAGTCCGAGATCCGCGGA
ATTCTCACATCCTCACAAAAAGCATAACGTGAAGAATGAATGTTGGAATT
GGTGTGGAGTGTTTAAATTCTCAAAGCCTTCCTTTACTGATAGACTTCAT
TCCATAGGATTGCATCACAAAAACCTCTCCAAACTGTGCCACCAATTAGG
GACCAAGTATTTCAATATCTGAGCCTACAGGGAGCATTCTCATTCAAATG
ATTACAACAAAAATGATGATGTGAATAGTGGTGATACTGGTTGTGATTGG
GATTATAGTAATGATCACACAAACAAACTTCCTGCAAGCCTATCATCTGT
TTTTAAACATTATCTATAATCAGATTCTCATGAACTTCCCATTTTTCAAT
TATGAAAATCTAGTCCTCAAGCACAAAAGTGACCTAATAAAGGTCATCTG
GCAATTAAGGTTTAAAAGCAAAAAAGACAGAAATGCACACACCACTTGAA
ATTCTGGACAGATCAGCTTGAAATCTAGCTGCTGAGAAAATTCTCCAGAA
GTTACCTTTCTTTCCTAGTAACTGAAAAAAATTCTTTTCATGGTCTTTTT
TTTTTCCTATTGAATCTGTCTTCTTTTATCCCTCTTGATTATCCCTTTCC
CTGTGAAGTCTGTTTT

NNNCCGAATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACTGAATGGC
AGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGT
CAATTAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAG
ATCAAAAATTTAGTTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGG
AACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACTACTCTGGA
AATCAGTCTGGCGGTTCCTTAGAAAATTGGACATAGTACTACCAGAGGAT
CCAGCAATACCTCTCCTGGGCATATATCAAGAAGATGTCCCAACTGGTAA
GAAGGACACATGTTCCACTATGCCCATAGCAGCCTTTTTTATAATAGTCA
GTAGCTGGAAAGAACCCTGATGCCCCTCAACAGAGGAATGGATACAGAAA
ATGTGGTACATTTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGA
ATCCATGACATTCCTAGGCAAATGGATGGACCTGGAGGACATCATCCTGA
GTGAGGTAACTCAATCACAAAGGAACTCACACAATATGTACTCACTGATA
AGTGGATATTAGTTCCAAACTTA

Query= MSMg01no143_c12.b1 MSMg01no143_c12.b1 CHROMAT_FILE:
MSMg01no143_c12.b1 PHD_FILE: MSMg01no143_c12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:03:38 2005
         (623 letters)



>mm_chr8_76042823_76043846
          Length = 1024

 Score = 1096 bits (567), Expect = 0.0
 Identities = 600/611 (98%), Gaps = 2/611 (0%)
 Strand = Plus / Minus

                                                                        
Query: 15   catcctcaca-aaaagcataacgtgaagaatgaatgttggaattggtgtggagtgtttaa 73
            |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1024 catcctcaaacaaaagcataacgtgaagaatgaatgttggaattggtgtggagtgtttaa 965

                                                                        
Query: 74   attctcaaagccttcctttactgatagacttcattccataggattgcatcacaaaaacct 133
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964  attctcaaagccttcctttactgatagacttcattccataggattgcatcacaaaaacct 905

                                                                        
Query: 134  ctccaaactgtgccaccaattagggaccaagtatttcaatatctgagcctacagggagca 193
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904  ctccaaactgtgccaccaattagggaccaagtatttcaatatctgagcctacagggagca 845

                                                                        
Query: 194  ttctcattcaaatgattacaacaaaaatgatgatgtgaatagtggtgatactggttgtga 253
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| 
Sbjct: 844  ttctcattcaaatgattacaacaaaaatgatgatgtgaatagtggtgataatggttgtgg 785

                                                                        
Query: 254  ttgggattatagtaatgatcacacaaacaaacttcctgcaagcctatcatctgtttttaa 313
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 784  ttgggattatagtaatgatcacacaaacaaacttcctgcaagcctatcatctttttttaa 725

                                                                        
Query: 314  acattatctataatcagattctcatgaacttcccatttttcaattatgaaaatctagtcc 373
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724  acattatctataatcagattctcatgaacttcccatttttcaattatgaaaatctagtcc 665

                                                                        
Query: 374  tcaagcacaaaagtgacctaataaaggtcatctggcaattaaggtttaaaagcaaaaaag 433
            ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664  tcaagtagaaaagtgacctaataaaggtcatctggcaattaaggtttaaaagcaaaaaag 605

                                                                        
Query: 434  acagaaatgcacacaccacttgaaattctggacagatcagcttgaaatctagctgctgag 493
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604  acagaaatgcacacaccacttgaaattctggacagatcagcttgaaatctagctgctgag 545

                                                                        
Query: 494  aaaattctccagaagttacctttctttcctagtaactg-aaaaaaattcttttcatggtc 552
            |||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||
Sbjct: 544  aaaattctccagaagttacctttctttcctagtaactgaaaaaaaaatattttcatggtc 485

                                                                        
Query: 553  ttttttttttcctattgaatctgtcttcttttatccctcttgattatccctttccctgtg 612
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 484  ttttttttttcctattgaatctgtcttcttttatccctcttgattatcccttttcctgtg 425

                       
Query: 613  aagtctgtttt 623
            |||||||||||
Sbjct: 424  aagtctgtttt 414


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1024
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1014
Effective search space:   621582
Effective search space used:   621582
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)