Query= MSMg01no143_i12.b1 MSMg01no143_i12.b1 CHROMAT_FILE:
MSMg01no143_i12.b1 PHD_FILE: MSMg01no143_i12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:07 2005
(639 letters)
>mm_chr8_58095276_58096314
Length = 1039
Score = 1013 bits (524), Expect = 0.0
Identities = 610/644 (94%), Gaps = 11/644 (1%)
Strand = Plus / Plus
Query: 6 aattccttgttagctaccatgggaagttagataatcatttctgtaaccatgatttttttt 65
|||| ||||||||| | |||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 197 aattacttgttagccatcatgggaagttagataatcatttccctaaccatgaattttttt 256
Query: 66 ccaacttgcctatgatgagcatatccaataggcactttgtatctgaaaggcccatcccac 125
||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 257 ccaacttgcctatcatgagcatatccaataggcattttgtttctgaaaggcccatcccac 316
Query: 126 aggctgcctctgactttatggatgcctctaagaatggttttgattctgtcatatatagct 185
||||||||| |||||| ||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 317 aggctgcctgtgacttcatggatgcctctaagaatggtttgggttctgtcatatatagct 376
Query: 186 ct-aataactctactccaaaagtgtttaaacaatacttcaacagtccagttcaattaggt 244
| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 377 -tgaataactctactccaaaagtgtttaaataatacttcaacagtccagtttaattaggt 435
Query: 245 aaattgctagc---------cattttaactatacttagtattggctagggaacatccaca 295
|||||||| | |||||||||| |||| |||||||||||||||||||| |||
Sbjct: 436 gaattgctaactttactttacattttaactttactgagtattggctagggaacatcaaca 495
Query: 296 tcttcagggatagccaatatgccatcaatttaatcagatctctaccatcagcttttgtca 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tcttcagggatagccaatatgccatcaatttaatcagatctctaccatcagcttttgtca 555
Query: 356 agccctctggtcgaccctcccacctgactatgatacaatacaatcaatgagcaaatggtc 415
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 agccctctggtcgacccttacacctgactatgatacaatacaatcaatgagcaaatggtc 615
Query: 416 tcacacttttatatcaaacatgctcatcttcatcttaatctactaggtaatcttaatcct 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tcacacttttatatcaaacatgctcatcttcatcttaatctactaggtaatcttaatcct 675
Query: 476 gtaaggcaactgagaaatataccagctgtgttcgacatttttatcatccagttagaagta 535
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 676 gtaaggcaactgagaaatataccagctgttttcgacatttttatcatccagttagaagta 735
Query: 536 gtgcaatccctacatgcatggttccaaaattttgcccatttattacatagacttttctct 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 gtgcaatccctacatgcatggttccaaaattttgcccatttattacatagacttttctct 795
Query: 596 aatgttactccacccccatgcaaacatttagtgtgtgcctgctc 639
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 aatgttactccacccccatgcaaacatttagtgtgtgcctgctc 839
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space: 647241
Effective search space used: 647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no143_i12.g1 MSMg01no143_i12.g1 CHROMAT_FILE:
MSMg01no143_i12.g1 PHD_FILE: MSMg01no143_i12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:07 2005
(240 letters)
>mm_chr8_58156935_58157574
Length = 640
Score = 410 bits (212), Expect = e-119
Identities = 233/240 (97%)
Strand = Plus / Minus
Query: 1 tgtatcatcccttaccataggacacaatttgctagctcagtgactaacaaggaaacaaat 60
||||||||||||||||| | |||||||||||||||||||||||| || ||||||||||||
Sbjct: 440 tgtatcatcccttaccaaaagacacaatttgctagctcagtgacaaaaaaggaaacaaat 381
Query: 61 aacaacaacaactagcttactccagtggcaaattataaatgctaacattgatcaaaatgg 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aacaacaacaactagcttgctccagtggcaaattataaatgctaacattgatcaaaatgg 321
Query: 121 aagtttctgttaacccttgtccaactcattgtttaatatattcataatatattctaatct 180
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 320 aagtttctgttaacccttgtccaaatcattgtttaatatattcataatatattccaatct 261
Query: 181 tgaaactaattatttataactattattaaacattttaaagaaactaaagcttttatagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tgaaactaattatttataactattattaaacattttaaagaaactaaagcttttatagag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
