Query= MSMg01no143_m02.b1 MSMg01no143_m02.b1 CHROMAT_FILE:
MSMg01no143_m02.b1 PHD_FILE: MSMg01no143_m02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:23 2005
(202 letters)
>mm_chr8_120763379_120763981
Length = 603
Score = 383 bits (198), Expect = e-111
Identities = 201/202 (99%), Gaps = 1/202 (0%)
Strand = Plus / Plus
Query: 1 catgtgattatcaggaagac-tggctacctttggagcgtcgcagagatgctgtggattct 59
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catgtgattatcaggaagacatggctacctttggagcgtcgcagagatgctgtggattct 260
Query: 60 gattgtaccatttctgaactgtgtatatggggacacatcactgacccttgctgatctgtc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gattgtaccatttctgaactgtgtatatggggacacatcactgacccttgctgatctgtc 320
Query: 120 ttcatcagctgccctgtctgtcactacagccaccataaacatgtgactcccaagctacca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcatcagctgccctgtctgtcactacagccaccataaacatgtgactcccaagctacca 380
Query: 180 aaatgtgtccggtgtgtcttga 201
||||||||||||||||||||||
Sbjct: 381 aaatgtgtccggtgtgtcttga 402
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 202
Length of database: 603
Length adjustment: 8
Effective length of query: 194
Effective length of database: 595
Effective search space: 115430
Effective search space used: 115430
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no143_m02.g1 MSMg01no143_m02.g1 CHROMAT_FILE:
MSMg01no143_m02.g1 PHD_FILE: MSMg01no143_m02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:23 2005
(181 letters)
>mm_chr8_120917668_120918248
Length = 581
Score = 319 bits (165), Expect = 6e-92
Identities = 177/181 (97%)
Strand = Plus / Minus
Query: 1 attgcctcgtttagcaaaggcctcttccgaattggaacatggacaggctacaataatgag 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attgcctcgttcagcaaaggcctcttccgaattggaacatggacaggctacaataatgag 322
Query: 61 agtcatttcctgcagactgtggatccagtctcttttcttagcagatgtacgtcacactgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 agtcatttcctgcagactgtggatccagtctcttttcttagcagatgtacgtcactctgt 262
Query: 121 ggagaagcagccaggcctttggcagagtccatatctgtgacattaaaacaagccagtgag 180
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 261 ggagaagcagccaggcctttggcagagtccatagctgtgacattaaaaaaagccagtgag 202
Query: 181 t 181
|
Sbjct: 201 t 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 181
Length of database: 581
Length adjustment: 8
Effective length of query: 173
Effective length of database: 573
Effective search space: 99129
Effective search space used: 99129
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
