CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTGTGTGCCTCATTTGGAGGCTGGTATAGAAAAGTACACCAAACAAC
TGTGCTATATTTTGAACTATATCAAGAAAAGCAGTGAGGGTTGGGGAGTT
GTACTGTTGGCAGAATGCTGGCCTAGAATGTATGAGTTGCTAGGTTTAGT
TCCCGGTACTCCATAACACCAGGTGAAGTGGTATACTCTGTAATCCCAGC
ATTTGAGATGTTGAGGAAGGAAGATCAGAAACTAAAGACATCCTTGGCTA
TATAGGTAGTTCAAGGCCAGCCTGGGATACATAGACCATGTGAAAAAAAT
AGACAACAAGAAAAGGAGAGGGAAGTGGAGGAGAAGGAAAGAGAGGAAGA
AGGAGGAAGAGGACCCCCCCACTCTGGATACATCTCCCTGCTTCTTCCAT
GAGCACCATGAAGTAATAATTGTGACTTTTTTCTCTTAACCCCTGAAGCC
TAAAATATTTATCTCAACTTTTATATTTAACACTTTATCCTAATACCTTA
AGTGTTCTTTGAGTATTCTGTGTGCCTTGTTTTCACAAAACACATTGGAA
TTATAATACATTGCTGGTAACCATCCTCTAATACTTGCCCTGTAATCTTT
CCTCCCTATACCACCCTGTCTTTGACTCCCTGTATATTTGAGCCATGTTT
CCCCCTTTCACCCCTGTTCTACATTTTCTACTCTTTTGTCCTTTTTCTTC

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCCCAGGGTTTGATTTAAGGTATGG
TTTTTGTTCACGTACATCTCCTCTCATTTAGATAAACGTTTCTATCCAAC
TAATATTGCCTAATGCCAGGAAACTCACACATCTGAATGCAATGTAGGGT
GAAACCCATTGTCTTGTTCAATGTCTCATTCCCAACACTAAATCTAAGAG
CACACACTTATGATCAGAGCACATACGTATGGGAGTAGAACAAGTGGTTC
TAATTAATGTTTCAGGTAAGAAGATATGCGAGAGCTTAGAAAATAGACAT
CTGATATATTTCACAAGATTAATAGTAAGTCCTGGGAAACTTTCTTTACA
AATTGAATGGCCACAGCAAATGTTTCTGAGCTAACATCGGACTTTACCTT
TATCATACAAATACAAACTAAGCAAAAGTCATCACCCTGAAAATGTCTTC
TGAAATACAAAAACAAATGTTTTCACTACATAACTGTTCTTCCTCCCAAG
GTGTCTATTCTTTTGTCTTTTCCAGTGTTAATGAGTTAGTAAATATGATT
GCTATGAAACATAATAAATATCTGGAATCTACAGTTGTGAGTGTGTTTCT
TTTTTTTTCTCTTTCTTCCTTTTTTCCCCTCTTCCCTCCTCTTTTCTCTA
CCCTTTCTTTTCCCCCCTTCTTTTTCTCCTTTTTCCCTCCTTTCTCN

Query= MSMg01no144_c18.g1 MSMg01no144_c18.g1 CHROMAT_FILE:
MSMg01no144_c18.g1 PHD_FILE: MSMg01no144_c18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:55 2005
         (571 letters)



>mm_chr8_42914056_42915026
          Length = 971

 Score = 1094 bits (566), Expect = 0.0
 Identities = 569/570 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   cccagggtttgatttaaggtatggtttttgttcacgtacatctcctctcatttagataaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 cccagggtttgatttaaggtatggtttttgttcacgtacatctcctctcatttagataaa 711

                                                                       
Query: 61  cgtttctatccaactaatattgcctaatgccaggaaactcacacatctgaatgcaatgta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 cgtttctatccaactaatattgcctaatgccaggaaactcacacatctgaatgcaatgta 651

                                                                       
Query: 121 gggtgaaacccattgtcttgttcaatgtctcattcccaacactaaatctaagagcacaca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 gggtgaaacccattgtcttgttcaatgtctcattcccaacactaaatctaagagcacaca 591

                                                                       
Query: 181 cttatgatcagagcacatacgtatgggagtagaacaagtggttctaattaatgtttcagg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 cttatgatcagagcacatacgtatgggagtagaacaagtggttctaattaatgtttcagg 531

                                                                       
Query: 241 taagaagatatgcgagagcttagaaaatagacatctgatatatttcacaagattaatagt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 taagaagatatgcgagagcttagaaaatagacatctgatatatttcacaagattaatagt 471

                                                                       
Query: 301 aagtcctgggaaactttctttacaaattgaatggccacagcaaatgtttctgagctaaca 360
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 470 aagtcctgggaaactttctttacaaattgaatggccacagtaaatgtttctgagctaaca 411

                                                                       
Query: 361 tcggactttacctttatcatacaaatacaaactaagcaaaagtcatcaccctgaaaatgt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 tcggactttacctttatcatacaaatacaaactaagcaaaagtcatcaccctgaaaatgt 351

                                                                       
Query: 421 cttctgaaatacaaaaacaaatgttttcactacataactgttcttcctcccaaggtgtct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 cttctgaaatacaaaaacaaatgttttcactacataactgttcttcctcccaaggtgtct 291

                                                                       
Query: 481 attcttttgtcttttccagtgttaatgagttagtaaatatgattgctatgaaacataata 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 attcttttgtcttttccagtgttaatgagttagtaaatatgattgctatgaaacataata 231

                                         
Query: 541 aatatctggaatctacagttgtgagtgtgt 570
           ||||||||||||||||||||||||||||||
Sbjct: 230 aatatctggaatctacagttgtgagtgtgt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space:   539121
Effective search space used:   539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)