Query= MSMg01no144_e07.b1 MSMg01no144_e07.b1 CHROMAT_FILE:
MSMg01no144_e07.b1 PHD_FILE: MSMg01no144_e07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:03 2005
(268 letters)
>mm_chr8_23912358_23913025
Length = 668
Score = 422 bits (218), Expect = e-122
Identities = 257/276 (93%), Gaps = 12/276 (4%)
Strand = Plus / Minus
Query: 4 ggaattccagtcatc-ttcttgcatgccagcaactatgcaccgtgaaaagctgactattt 62
|||||||||||| || | | |||||||||||||||||||||| |||||||| ||||||||
Sbjct: 419 ggaattccagtcgtcgtgc-tgcatgccagcaactatgcaccatgaaaagccgactattt 361
Query: 63 caagcccagaatatggagcagacagaagaatccagtagttaagttgttaagctactttcc 122
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 caagcccagaatacggagcagacagaagaatccagtagttaagttgttaagctactttcc 301
Query: 123 atgggtcctgctgtgatttctaagtacgttaccccatacaccacttaacaatctattgcc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 atgggtcctgctgtgatttctaagtacgttaccccatacaccacttaacaatctattgcc 241
Query: 183 ataccaattactgtgtaacttactgaaagccaggaa----------gagtgtgtgtgtgt 232
|||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 240 ataccaattactgtgtaacttactgaaagccaggaagtgtgtgtgtgtgtgtgtgtgtgt 181
Query: 233 gtgtgtgtgtgtgtgtgttgcctgtttaaaaccaca 268
|||||||||||||||||||| |||||||||||||||
Sbjct: 180 gtgtgtgtgtgtgtgtgttgtctgtttaaaaccaca 145
Score = 58.7 bits (30), Expect = 4e-13
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 221 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 250
||||||||||||||||||||||||||||||
Sbjct: 598 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 569
Score = 58.7 bits (30), Expect = 4e-13
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 221 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 250
||||||||||||||||||||||||||||||
Sbjct: 600 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 571
Score = 58.7 bits (30), Expect = 4e-13
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 221 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 250
||||||||||||||||||||||||||||||
Sbjct: 602 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 573
Score = 58.7 bits (30), Expect = 4e-13
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 221 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 250
||||||||||||||||||||||||||||||
Sbjct: 604 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 575
Score = 56.8 bits (29), Expect = 1e-12
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 221 gtgtgtgtgtgtgtgtgtgtgtgtgtgtg 249
|||||||||||||||||||||||||||||
Sbjct: 596 gtgtgtgtgtgtgtgtgtgtgtgtgtgtg 568
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 56
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 6
Length of query: 268
Length of database: 668
Length adjustment: 9
Effective length of query: 259
Effective length of database: 659
Effective search space: 170681
Effective search space used: 170681
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no144_e07.g1 MSMg01no144_e07.g1 CHROMAT_FILE:
MSMg01no144_e07.g1 PHD_FILE: MSMg01no144_e07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:03 2005
(345 letters)
>mm_chr8_23750307_23751051
Length = 745
Score = 648 bits (335), Expect = 0.0
Identities = 341/343 (99%)
Strand = Plus / Plus
Query: 1 tctatgtaaacctactaattaggccaacctagaatgaaatcaaagacacacgcacaaggg 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 tctatgtaaacctactaattaggccaacctagaatgaaatcaaagacacatgcacaaggg 260
Query: 61 ccctacttccaacagggtaactttctactacactgtaactggtatctcaaatgagttaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccctacttccaacagggtaactttctactacactgtaactggtatctcaaatgagttaaa 320
Query: 121 agacttccattgtctgtccaatcactcaggtgcaatgacagagacaacaaaatgtgggat 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agacttccattgtctgtctaatcactcaggtgcaatgacagagacaacaaaatgtgggat 380
Query: 181 aaacatgcccaagccgacttaactaatactatgggtcttaggaagcctaggaagtgacac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaacatgcccaagccgacttaactaatactatgggtcttaggaagcctaggaagtgacac 440
Query: 241 taatcacatctttttaatccaagtctgtcacccactaggtaactttaacatcaagccatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taatcacatctttttaatccaagtctgtcacccactaggtaactttaacatcaagccatg 500
Query: 301 aataatgagaatgaagtatgttacctcttctgaaactgccaca 343
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aataatgagaatgaagtatgttacctcttctgaaactgccaca 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
