Query= MSMg01no144_f09.b1 MSMg01no144_f09.b1 CHROMAT_FILE:
MSMg01no144_f09.b1 PHD_FILE: MSMg01no144_f09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:08 2005
(371 letters)
>mm_chr8_125381473_125382243
Length = 771
Score = 640 bits (331), Expect = 0.0
Identities = 358/367 (97%)
Strand = Plus / Plus
Query: 5 gaattcccagatagtgccactgtcctctgcagggaatgaactctgtggagtgattagcct 64
|||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 205 gaattcccagatagtggtactgccctctgcagggaatgaactctgcggagtgattagcct 264
Query: 65 ccgctaccattacaatgttgggattcaggaggagctgtgagagtcacaaagtgtgcacaa 124
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccgctaccattacaatgctgggattcaggaggagctgtgagagtcacaaagtgtgcacaa 324
Query: 125 ggccaagagtcaagcctggaacctcctttatctgccaggctggcatgtagtgtgcttacc 184
|||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 325 ggccaagagtcaagcctggaacttcctttatctgccaggctggcatgtagtgtacttacc 384
Query: 185 tagtgtttgaaggccctggtttccatccccagcatagctagccaatgaattataactaga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tagtgtttgaaggccctggtttccatccccagcatagctagccaatgaattataactaga 444
Query: 245 gctttgaatagtattacagacctatgatacttatgatgctcaggagggtcatgagtttga 304
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 445 gctttgaatagtattacagacctatgatacttaggaggctcaggagggtcatgagtttga 504
Query: 305 agccagcctcaactacatagcagaagcctcaactacataccccaaggataaagccaaaca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agccagcctcaactacatagcagaagcctcaactacataccccaaggataaagccaaaca 564
Query: 365 aagcctg 371
|||||||
Sbjct: 565 aagcctg 571
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space: 275844
Effective search space used: 275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no144_f09.g1 MSMg01no144_f09.g1 CHROMAT_FILE:
MSMg01no144_f09.g1 PHD_FILE: MSMg01no144_f09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:08 2005
(534 letters)
>mm_chr8_125530093_125531026
Length = 934
Score = 772 bits (399), Expect = 0.0
Identities = 429/439 (97%), Gaps = 1/439 (0%)
Strand = Plus / Minus
Query: 97 tttttatctgtcacaaattgttctctttttaattaattaaaaaaatttaatctacctggt 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 934 tttttatctgtcacaaattgttctctttttaattaattaaaaaaatttaatctacctggt 875
Query: 157 gttttgctcacacgtgtgtctgtgtaccacatgcatgcctagtgcccctagaagccagag 216
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 874 gttttgctcacacgtgtgtctgtgtaccacatgcatgcctggtgcccctagaagccagag 815
Query: 217 agcgtgtggaggt-gggttacagacagttgagttgtcatgaggctgcagggagttgaatc 275
|| |||||||||| |||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 814 agggtgtggaggtggggttacagacagttgagctgccatgaggctgcagggagttgaatc 755
Query: 276 caggtcctctggaagagcttgaatcataaaaacattttgtttcagttaacatacagatgt 335
||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 754 caggtcctctggaagagctcgaatcacaaaaacattttgtttcagttaacatacagatgt 695
Query: 336 aaactctccccacataatagactgttattttattttttagaatatatttgaccttagggc 395
||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 aaactcttcctagataatagactgttattttattttttagaatatatttgaccttagggc 635
Query: 396 cccaaataagatctcagactcttgtcacattggtgaaatggaatggcttgggtttgctga 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 cccaaataagatctcagactcttgtcacattggtgaaatggaatggcttgggtttgctga 575
Query: 456 aggtttgtccctgacactttctggtagctctttgacaatggtgactttacttctttcctg 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 aggtttgtccctgacactttctggtagctctttgacaatggtgactttacttctttcctg 515
Query: 516 tttttggagtaaggtctca 534
|||||||||||||||||||
Sbjct: 514 tttttggagtaaggtctca 496
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 934
Length adjustment: 10
Effective length of query: 524
Effective length of database: 924
Effective search space: 484176
Effective search space used: 484176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
