Query= MSMg01no144_g05.b1 MSMg01no144_g05.b1 CHROMAT_FILE:
MSMg01no144_g05.b1 PHD_FILE: MSMg01no144_g05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:12 2005
(141 letters)
>mm_chr8_49148692_49149233
Length = 542
Score = 223 bits (115), Expect = 5e-63
Identities = 135/145 (93%), Gaps = 7/145 (4%)
Strand = Plus / Minus
Query: 1 agccaaactgttcatctctggtacatgaaaaattatcactgttgttgt----cccaccat 56
|||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 342 agccaaactgttcatctctggtacatgaaaaattatcactgttgttgttaaa---accat 286
Query: 57 atgctctaggtaagaggacaggctttgtgttcactgtgacatttgtgctgaggaatgtta 116
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 285 atgctctaggtaagaggacaggctttgtgttcgctgtgacatttgtgctgaggaatgtta 226
Query: 117 atgcacttaacgttagtatgtgctt 141
||| |||||| ||||||||||||||
Sbjct: 225 atgtacttaatgttagtatgtgctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 141
Length of database: 542
Length adjustment: 8
Effective length of query: 133
Effective length of database: 534
Effective search space: 71022
Effective search space used: 71022
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no144_g05.g1 MSMg01no144_g05.g1 CHROMAT_FILE:
MSMg01no144_g05.g1 PHD_FILE: MSMg01no144_g05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:12 2005
(339 letters)
>mm_chr8_49043394_49044132
Length = 739
Score = 648 bits (335), Expect = 0.0
Identities = 338/339 (99%)
Strand = Plus / Plus
Query: 1 agtctgtaaatcaggctggcctcaaactcacagggatcctgcagctgctgcctctagatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtctgtaaatcaggctggcctcaaactcacagggatcctgcagctgctgcctctagatg 260
Query: 61 gttagaggcaaatgctactaccatctagccatcttggagcttttcaagactgccatatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttagaggcaaatgctactaccatctagccatcttggagcttttcaagactgccatatat 320
Query: 121 actgaattgtaccctatggagtcagagtgtggtcctccacttaagccgggcatcctaaat 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 321 actgaattgtaccctatggagtcagagtgtggtcctccacttaggccgggcatcctaaat 380
Query: 181 aggggaaggagagctggtgacaaaagttgcaaaagcctgagtgaaatactgcatcagcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggggaaggagagctggtgacaaaagttgcaaaagcctgagtgaaatactgcatcagcat 440
Query: 241 gtgtcctccaaaagaccactgcacataaagagtaatgtagctacagtgttaaattcttat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgtcctccaaaagaccactgcacataaagagtaatgtagctacagtgttaaattcttat 500
Query: 301 ggagaggaacaggcaattggggacggcatatctgaaagg 339
|||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggagaggaacaggcaattggggacggcatatctgaaagg 539
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space: 240900
Effective search space used: 240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
