Query= MSMg01no144_n08.b1 MSMg01no144_n08.b1 CHROMAT_FILE:
MSMg01no144_n08.b1 PHD_FILE: MSMg01no144_n08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:46 2005
(651 letters)
>mm_chr8_9309452_9310501
Length = 1050
Score = 1156 bits (598), Expect = 0.0
Identities = 634/646 (98%), Gaps = 1/646 (0%)
Strand = Plus / Plus
Query: 6 gaattccagttggtcacccagaccaggatgctgggatttcagcaagtctaacctgcaaaa 65
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattccagttggtcagccagaccaggatgctgggatttcagcaagtctaacctgcaaaa 265
Query: 66 gcttctgacatctaaccaccccacaaagactccacatccaccagcagggaccaggtgttc 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gcttctgacatctaaccaccccacaaagactccacatccaccagcagggaccaggtgttc 325
Query: 126 acagcgtgaacttgcggggacattttatcctaaagcatcagtgatggattctgacagtga 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 326 acagcgtgaacttgcggggacattttatcctaaagcatcagtgatggattctgac-gtga 384
Query: 186 ggtgatttgcaaacccacaggcctgagtccactgccttttataattatgctatgtaaatg 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggtgatttgcaaacccacaggcctgagtccactgccttttataattatgctatgtaaatg 444
Query: 246 aacaagctaaagtatgatgtatccaccacagcactgcagctgcagccatggacacaacac 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aacaagctaaagtatgatgtatccaccacagcactgcagctgcagccatggacacaacac 504
Query: 306 aaacatgctgtgctacctgggtgtactttttgtcagacttatacactcaggtcgtcagga 365
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 505 aaacatgctgtgctacctgggtgtactttttgtcagacttatacacccaggtcgtcagga 564
Query: 366 agaggaaacctcaattgagaaactgccctcactaggcaagacgatggggcatcttcttga 425
||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 565 agaggaaacctcaattgagaaacagccctcactaggcaagacgatggggcatcttattga 624
Query: 426 ttagtgattgccagaggagcacccagcacattgtgggtggtgctgtcccttggcagcagg 485
||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 625 ttagtgattgccagaggagggcccagcacattgtgggtggtgccatcccttggcagcaga 684
Query: 486 tactgagttgtataattaagcaggctgaaccaatcaaggagagaaagacaataagcatag 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 685 tactgagttgtataattaagcaggctgaaccaatcaaggagagaaagacaataagcaaaa 744
Query: 546 ttcctccatggcctctgcttcagctcctgcctccaggttcctgccttgagttcatgccct 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ttcctccatggcctctgcttcagctcctgcctccaggttcctgccttgagttcatgccct 804
Query: 606 gatcttcctcagtgatggaaaatgaccttgttttggccatgctaat 651
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gatcttcctcagtgatggaaaatgaccttgttttggccatgctaat 850
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1050
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1040
Effective search space: 666640
Effective search space used: 666640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no144_n08.g1 MSMg01no144_n08.g1 CHROMAT_FILE:
MSMg01no144_n08.g1 PHD_FILE: MSMg01no144_n08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:46 2005
(637 letters)
>mm_chr8_9419075_9420111
Length = 1037
Score = 1191 bits (616), Expect = 0.0
Identities = 631/636 (99%)
Strand = Plus / Minus
Query: 1 acagacagaattaaagaggagaggtgggagcagcacctgtgtttacatttggaaatgtgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 acagacagaattaaagaggagaggtgggagcagcacctgtgtttacatttggaaatgtgt 777
Query: 61 tttaaagagatccatagtcttcagttgctggagtagaaaagcaactgtgaacagaggttg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 776 tttaaagagatccatagtcttcagttgctggagtagaaaagcaactgtgaacagagattg 717
Query: 121 ccaaagacaaataaataaattaaaccgcaggatgctcagaaagtgactggttgtgaggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 ccaaagacaaataaataaattaaaccgcaggatgctcagaaagtgactggttgtgaggtt 657
Query: 181 cctttaaggaaaacaaatattaaaccatttgtgtaaccaactcttagctttctgtcttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 cctttaaggaaaacaaatattaaaccatttgtgtaaccaactcttagctttctgtcttcc 597
Query: 241 tctgctcttatttgtaattggccacttggccttaaacagtaagtgtattgtactgacttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 tctgctcttatttgtaattggccacttggccttaaacagtaagtgtattgtactgacttc 537
Query: 301 ggaacccatgggtatgtagggttttaatttatcttagatttcaaaagttacacttacctt 360
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 ggaacccatgtgtatgtagggttttaatttatcttagatttcaaaagttacacttacctt 477
Query: 361 tcctgtaaatgtttacataccacctcaaagatctattaggataagactttattctgagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 tcctgtaaatgtttacataccacctcaaagatctattaggataagactttattctgagaa 417
Query: 421 tgtgggaactcagagcagaaagcaagcctgcctcttagcagcctgtgaccgtggccctgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 tgtgggaactcagagcagaaagcaagcctgcctcttagcagcctgtgaccgtggccctgg 357
Query: 481 gctcagtatggtgctgacacaatcaaaagcaaccggcctcttaaattgggccaaagccag 540
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 gctcactatggtgctgacacaatcaaaagcaaccggcctcttaaattgggccaaagccag 297
Query: 541 tgctggttatgatgtctgaagtctcaatccttccagctcgcagcagttggcttatttgac 600
||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 296 tgctggttacgatgtctgaagtctcaatccctccagctcgcagcagttggcttatttgac 237
Query: 601 atccaggtcatctgagagcagcttctcttcctggtc 636
||||||||||||||||||||||||||||||||||||
Sbjct: 236 atccaggtcatctgagagcagcttctcttcctggtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space: 643929
Effective search space used: 643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
