NTTCATXXXXXXXXXXXXXXXXXXXXXXXCTATTTCGAGAGAATCCGCGG
AATTCTTTGTTCTGCCCTGATCCCCATTTTTAATGGGGTTAGTTGATTTT
CTGGATCCCACCGTCTTAGGTTCTTTATATATATTGGATATTAGTCCCCT
ATCTGATTTAGGATAGGTAACGATTCTTTCCCAATCTGTTGATGGTCTTT
TTGTCTTGTTGACTGTGTGTTTTGCCTTGCAGAAGCTTTGCAACTTCATG
AGGTCCCATTCATCGATTCTCGATCTTACTGCACAAGCCATTGCTGTTCT
ATTCAGGAACTTTTCCCCTCTACTCATATCTTAGAGGCTTTTCCCTACTT
TCTCCTCTATAACTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTGATC
CACTTAGATTTGGCCTCACCCCAAGGAGATAGGAATGGATCAATTTGAAT
TCTTCTACATGATAACTGCCAGTTGTGCCAGCACCATTTGTTGAAAATGC
TGTCTTTTTTCCATGGGCAGTTTTTGCTCCCTTGTCAAAGATCAAGTGAC
CATAGGTGTGTGGGTTCATCTCTGGGTCTTCAAATCTATTCCATTGGTAA
CTCTGGAGATAGAAACCCTAGGAAAGCAATCAGCAAACAGAGATTAGAGC
ATCAGCCACAGAATACAAGAGATGTAAGAGAGAATCTCAAGTGCAAAAGA
TT

NCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXATGAAAACAGGTGGATGAAGTTTTGC
ATGGAATAAATTTTAACTCGTTTGGACTTGATCATCTCATACCCAGCAAT
TTTAAGATGTCTCAATTTAGACTGGGAAAAATAACAACTATCCAAATAGT
TTTTATTTAAAGTAGCTATTTGGAGCTTTAAAAGTTAGAATTTCATAACT
ATAACAGTTTGGTTTCAAGCATGTTGATTATTTTATTATGCTCCTGATAC
TGGAATTTAAGTTTTGAAAGGCACAGACAAAATAGAAATTCTAACTTCAG
TCCCTGATGCTTTCAAAACTAATGCTAGTTTTTCTTCCCTGAGTTGTTTG
GTTTGGTGGTCTTCAAGACCATGAGATCAAAATGAGGGCTATAATTTGTT
TCTGTGTTTCCCATCCTTGTTACAGAATCTCAGTTTGTTTTTTTCAGATA
ATAGTGCCTAAATATCTCTCAAAATTATCCTTTTTCTTTTAAGTCACAGC
ATTAAACTTTCTTCTAAACTACTGAAATAACCTTTGGACTAGTTTGCCTA
CATCTAATGCTTTACCCTTTCAACTAATCCTAAACATTTAATCCTATAGT
CTCTTAAAACATTTAACTTGTCACCATGACTAAAAGGTTTAGTTCTCCAT
GATA

Query= MSMg01no145_b08.g1 MSMg01no145_b08.g1 CHROMAT_FILE:
MSMg01no145_b08.g1 PHD_FILE: MSMg01no145_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:04 2005
         (575 letters)



>mm_chr8_58065155_58066129
          Length = 975

 Score = 1006 bits (520), Expect = 0.0
 Identities = 562/576 (97%), Gaps = 2/576 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgaaaacaggtggatgaagttttgcatggaataaattttaactcgtttggacttgatca 60
           ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 775 atgaaaacaggtggatgaagttttgcatggaataaatttcaactagtttggacttgatca 716

                                                                       
Query: 61  tctcatacccagcaattttaagatgtctcaatttagactgggaaaaataacaactatcca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 tctcatacccagcaattttaagatgtctcaatttagactgggaaaaataacaactatcca 656

                                                                       
Query: 121 aatag-tttttatttaaagtagctatttggagctttaaaagttagaatttcataactata 179
           ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 aatagttttttttttaaagtagctatttggagctttaaaagttagaatttcataactata 596

                                                                       
Query: 180 acagtttggtttcaagcatgttgattattttattatgctcctgatactggaatttaagtt 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 acagtttggtttcaagcatgttgattattttattatgctcctgatactggaatttaagtt 536

                                                                       
Query: 240 ttgaaaggcacagacaaaatagaaattctaacttcagtccctgatgctttcaaaactaat 299
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 ttgaaaggcacagacaagatagaaattctaacttcagtccctgatgctttcaaaactaat 476

                                                                       
Query: 300 gctagtttttcttccctgagttgtttggtttggtggtcttcaagaccatgagatcaaaat 359
           |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Sbjct: 475 gctagtttttcttccctgagttgtttggtttggtggtcttcaagaggatgagatcaaaat 416

                                                                       
Query: 360 gagggctataatttgtttctgtgtttcccatccttgttacagaatctcagtttgtttttt 419
           |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 415 gaggtctataatttgtttctgtgtttcccatccttgttacagaatctcagtttg-ttttt 357

                                                                       
Query: 420 tcagataatagtgcctaaatatctctcaaaattatcctttttcttttaagtcacagcatt 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 tcagataatagtgcctaaatatctctcaaaattatcctttttcttttaagtcacagcatt 297

                                                                       
Query: 480 aaactttcttctaaactactgaaataacctttggactagtttgcctacatctaatgcttt 539
            ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 296 gaactttcttctaaactactgaaataacctttggactagtttgcctacttctgatgcttt 237

                                               
Query: 540 accctttcaactaatcctaaacatttaatcctatag 575
           || | |||||||||||||||||||||||||||||||
Sbjct: 236 actcattcaactaatcctaaacatttaatcctatag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 975
Length adjustment: 10
Effective length of query: 565
Effective length of database: 965
Effective search space:   545225
Effective search space used:   545225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)