NTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAGAGAAGGCGCG
GAATTCCACCCAGTTCCAATGGAAACAGATGCAAAGACCCACAGCCAAAC
ATTAGATGGAGCTGGGGAATCTTGTGGAAGAGTTGGAAGAAGGATTGAGG
AACCCTAAGGGGAAAGTGAACCCACAAGGAAACCAACAGTGCCAACTAAC
GTGGACACATGGAGGCTCACAGAGCCTGAACCACCAACCAAATTATGGGC
TGGGCTAAGGCTACTTGCACATATATAGCAGACGTGCAGCTTGGTTTTCA
TGTGGGTCTCTCAACAACTGAACAAGTGCTTACCCTGACCCTTGCCTGCC
TAATCCTGTTCCCTTAACTACACCTCCTTGACTAGTCAGTGAGAGAAGTT
GCATGTGCCAGTGTGGGGTGCCACCTGGGGAGAAGGTTCTTCCGTTCTCA
GAGAAGAAGGAAGGGGTAAGGGAGAGGTTACTTGGAGGAGGGGGACTGCT
CTCAGGATGTAAAGTGAATAAATAAATAAATTAATTAATTAATGAAAAAT
AAAATATGGTTAAAAAAAAGATGATCAGGGTGAGAGATCCCGTTCCACAG
TTATGTTTCCTTGTAAGGCAGAGAGTCCAAAGTCATCCTTTAACCCATTA
TATACATATGCATGCACACAAGAGCACACACAGGCACACACACACTCACA
CTCACT

NTCGATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTGTTTAGCTCTGTATTACATTTTTCA
ATTGGGTTATTTGATTTTTTTTTGGAGTCTAATTTCTTGAGTTCTTTATA
TATGTTGGATATTAGCCCTCTGTAGGATCTAGAGTTCGTAAAGATCTTGT
CCCATTTTGTAGGTTGCTGATTTGTCCTATTGAAGGTGTCTTTTGCTTTA
CAGAAGATTTTCAGTTTCATGAGGTCCCATTTACCAATTGTTGATCTTAG
ACTCTGAGACATTGGTGTTCTGTTTAGGAAATTTCCCCCTGTGTCACTGA
GTATGAGTCTCTTTTCTACTTTCTATTCTGTTAGACTTCTCAACAGAGAT
TCTAAAAGCAAGAAGATCCGCACCTTTTTTTNNTCAGACCCTAAGAAAAT
ATAAATGCTAGCCCCGGAAACTATATTTCGCAAAAATTTTCATAAATTGA
GAACAAATCNGNNTATTTTCCTGTGAAAAAACAATTTTAAACCTATCTTT
TTCCCACTATCTACTTTCCCTCTATGAAAAAGGGACCCCCCCATTTTAGG
GGGGGGGTGTTTCCCCCAAATTGGCTTAAAATTAAACTTTTCCCAAAACG
ACAATTAATAAACAGGAGGGGGGGGTANTTAATATTTCCTTTGGATAAAA
AAAAAAAAAAATTATAATCCCTCCCTAA

Query= MSMg01no145_e24.b1 MSMg01no145_e24.b1 CHROMAT_FILE:
MSMg01no145_e24.b1 PHD_FILE: MSMg01no145_e24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:22 2005
         (610 letters)



>mm_chr8_6920302_6921312
          Length = 1011

 Score = 1135 bits (587), Expect = 0.0
 Identities = 605/611 (99%), Gaps = 1/611 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gaaacagatgcaaagacccacagccaaacattagatggagctggggaatcttgtggaaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaaacagatgcaaagacccacagccaaacattagatggagctggggaatcttgtggaaga 260

                                                                       
Query: 61  gttggaagaaggattgaggaaccctaaggggaaagtgaacccacaaggaaaccaacagtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 261 gttggaagaaggattgaggaaccctaaggggaaagtgaacccacaaggaaaccaacagta 320

                                                                       
Query: 121 ccaactaacgtggacacatggaggctcacagagcctgaaccaccaaccaaattatgggct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccaactaacgtggacacatggaggctcacagagcctgaaccaccaaccaaattatgggct 380

                                                                       
Query: 181 gggctaaggctacttgcacatatatagcagacgtgcagcttggttttcatgtgggtctct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggctaaggctacttgcacatatatagcagacgtgcagcttggttttcatgtgggtctct 440

                                                                       
Query: 241 caacaactgaacaagtgcttaccctgacccttgcctgcctaatcctgttcccttaactac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caacaactgaacaagtgcttaccctgacccttgcctgcctaatcctgttcccttaactac 500

                                                                       
Query: 301 acctccttgactagtcagtgagagaagttgcatgtgccagtgtggggtgccacctgggga 360
           |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 501 acctccttgactagtcagtgagagaagttgcatgtgccagtgtggggtggtacctgggga 560

                                                                       
Query: 361 gaaggttcttccgttctcagagaagaaggaaggggtaagggagaggttacttggaggagg 420
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 561 gaaggttcttccgttctcagagaagaaggaaggggtaagggagagattacttggaggagg 620

                                                                       
Query: 421 gggactgctctcaggatgtaaagtgaataaataaataaattaattaattaatgaaaaata 480
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 621 gggactgctctcaggatgtaaagtgaataaataaattaattaattaattaatgaaaaata 680

                                                                       
Query: 481 aaatatggttaaaaaaaa-gatgatcagggtgagagatcccgttccacagttatgtttcc 539
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaatatggttaaaaaaaaagatgatcagggtgagagatcccgttccacagttatgtttcc 740

                                                                       
Query: 540 ttgtaaggcagagagtccaaagtcatcctttaacccattatatacatatgcatgcacaca 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttgtaaggcagagagtccaaagtcatcctttaacccattatatacatatgcatgcacaca 800

                      
Query: 600 agagcacacac 610
           |||||||||||
Sbjct: 801 agagcacacac 811


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1011
Length adjustment: 10
Effective length of query: 600
Effective length of database: 1001
Effective search space:   600600
Effective search space used:   600600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)