NNNTTCTCTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTCACCTGACCAATACCAAATGGCTGAGAAGCACCTGAAAAA
CTGTTCAGCATCTTTAATCTTCAGGGAAATGCAAATCAAAACAAACCTGA
GATTCCACCTCACACCAGTCAGAATAGCTAAGATCAAAAATTCAGGTGAC
AGCAGATACTGGCAAGGATGTGGAGAAAAAGGAACACTCCTCCATTGTTG
GTGGGATTGCAAGCTTGTACAACCACTCTGGGAATCAATCTGGCAGTTCC
TCAGAAAATTGGACATAGTACTACCAGAGGATCTCATAATACTTCTCCCT
GGGCATACATCCAGAAGATGTTCTAACCCGGTAAGAATGACACATGCTCC
CTTATTGTTCATAAGACCCTTTATTTCCCAAAACCCAAAATCTGGTAATA
ACCCCCAATGGCCCCCCCCCACAGGGGAAGGGTAAAACNTTATGGGGGNC
CCTTTCCCGGGCCCTTCCCCAAAAAGTTATACCTCAGCAGGTCCTCCTCT
CCCTTTTCCCCCTCTATCCCTCCTTCATCCTTGGGTGGCCAAAATCCCTA
TGTGATCTTCTTCTTTCCAAATAAACTACCATTATAGCGCCATCCCCGGC
TTAGCGAACTTATGCCTCCTATCCNTTCCTTCTCAATATCTACTTCAAAT
ATAAGGAGGGGAAATANTTAAATATATCATAATATACTTTTT

NNNCCCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXATTGCAAAATGTTTTATGAATA
CATGGACTGTTGCAAAGTAGCAGTTGAAATGACCAACAATCTGCTGGAAT
AGTAAAAATCTATGTTAGCAATGAAAATTAAAGTGAGATCCTTCCAAAAG
TTATATCAATTTTCTGTTAAATCTAGAGTATATTAAGCCAGGCATGGTGG
CACACTCCTTTAATCCCAGCCCTCTGGAGGCAGAGGCAGACAGATTTCTG
AGTTTGAGGCCAGTCTGGTCCACAAAGTGAGTTCCAGGACAGCAAGGGCT
ATAAAGAAAAACCCTGTCTCGAAAAAAAAAAAAAAAAAAAAAACACCAAA
AAAGTATATTATAGCACATGTACTACTAAAATTTTACTTACAAAAAAAAA
AAAAGCACAGAGTCAAAGCTTTTTAGATGACGTAGTTCAACAAAAGCAAA
TCCAAGACAAAGGTAAGATGCAGAAAGGACTCAAAAGGCCATGCATGACT
CTGTTGTAAAAATGAATCAATGCCTAGTCTCACAGGGTCCCCAATGGAGG
AGCTTAGAGAAAGTATCCAAGGAGTTAAAGGGAACCGCAACCCTATAGGT
GGAACAACAATACGAATTAACCAGTACCCCGGAGCTCTTGT

Query= MSMg01no145_m10.g1 MSMg01no145_m10.g1 CHROMAT_FILE:
MSMg01no145_m10.g1 PHD_FILE: MSMg01no145_m10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:58 2005
         (439 letters)



>mm_chr8_54017636_54018474
          Length = 839

 Score =  536 bits (277), Expect = e-156
 Identities = 384/441 (87%), Gaps = 38/441 (8%)
 Strand = Plus / Plus

                                                                       
Query: 1   attgcaaaatgttttatgaatacatggactgttgcaaagtagcagttgaaatgaccaaca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attgcaaaatgttttatgaatacatggactgttgcaaagtagcagttgaaatgaccaaca 260

                                                                       
Query: 61  atctgctggaatagtaaaaatctatgttagcaatgaaaattaaagtgagatccttccaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atctgctggaatagtaaaaatctatgttagcaatgaaaattaaagtgagatccttccaaa 320

                                                                       
Query: 121 agttatatcaattttctgttaaatctagagtatattaagccaggcatggtggcacactcc 180
           |||||||||||||||||||||| || ||||||||||||||||||| | ||||| ||||||
Sbjct: 321 agttatatcaattttctgttaattcaagagtatattaagccaggcgttgtggcgcactcc 380

                                                                       
Query: 181 tttaatcccagccctctggaggcagaggcagacagatttctgagtttgaggccagtctgg 240
           |||||||||||| ||||||||| |||||||| | ||||||||||||||||||||||||||
Sbjct: 381 tttaatcccagcactctggaggtagaggcaggctgatttctgagtttgaggccagtctgg 440

                                                                       
Query: 241 tccacaaagtgagttccaggacagcaagggctataaagaaaaaccctgtctcgaaaaaaa 300
           || |||||||||||||||||||||||||||||||||||| |||||||      || | | 
Sbjct: 441 tctacaaagtgagttccaggacagcaagggctataaagagaaaccct------aatatat 494

                                                                       
Query: 301 aaaaaaaaaaaaaaacaccaaaaaagtatat-tatagcac-atgtactactaaaatttta 358
           |                         ||||| ||||  |  || ||||||||||||||||
Sbjct: 495 a-------------------------tatatatata--attatttactactaaaatttta 527

                                                                       
Query: 359 cttacaaaaaaaaaaaaagcacagagtcaaagctttttagatgacgtagttcaacaaaag 418
           ||||||||||||||    ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 528 cttacaaaaaaaaag---gcacagagtcagagctttttagatgacgtagttcaacaaaag 584

                                
Query: 419 caaatccaagacaaaggtaag 439
           ||| |||||||||||||||||
Sbjct: 585 caagtccaagacaaaggtaag 605


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 839
Length adjustment: 9
Effective length of query: 430
Effective length of database: 830
Effective search space:   356900
Effective search space used:   356900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)