Query= MSMg01no146_l18.b1 MSMg01no146_l18.b1 CHROMAT_FILE:
MSMg01no146_l18.b1 PHD_FILE: MSMg01no146_l18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:08:51 2005
(651 letters)
>mm_chr8_95458547_95459597
Length = 1051
Score = 1228 bits (635), Expect = 0.0
Identities = 638/639 (99%)
Strand = Plus / Plus
Query: 13 acacacttgtgaaggcattcctccaaaaccaaggagataagaatcgactctcctgattca 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 acacacttgtgaaggcattcctccaaaaccaaggagataagaatcgactctcctgattca 272
Query: 73 caggattcctgtcaccactggaatggaagttgtatggagcacatggagataagaaaagcc 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 caggattcctgtcaccactggaatggaagttgtatggagcacatggagataagaaaagcc 332
Query: 133 agacacaggaaaaggaaaataaaacacataaaatttaacagtgcacagattgattagtgc 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 agacacaggaaaaggaaaataaaacacataaaatttaacagtgcacagattgattagtgc 392
Query: 193 agttaacaagagcactgtgccgagccaggcatgctcatgactattacccaggcaccgcta 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 agttaacaagagcactgtgccgagccaggcatgctcatgactattacccaggcaccgcta 452
Query: 253 aaagcaggaggatcatcacaagtttgtgatttcaaggtcaaccggggacagagggattaa 312
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 453 aaagcaggaggatcatcacaagtttgtgagttcaaggtcaaccggggacagagggattaa 512
Query: 313 gactcttgtttcaaaaacagaacaaaataaaacaagactgatacacatcatctgtgcttc 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 gactcttgtttcaaaaacagaacaaaataaaacaagactgatacacatcatctgtgcttc 572
Query: 373 aatgagctatcacttacccgactgttaaatgaaatgctttaaaagaagggtatggaggaa 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 aatgagctatcacttacccgactgttaaatgaaatgctttaaaagaagggtatggaggaa 632
Query: 433 taatctaaaataaattcacaagaactttgtggaggaaattctgaaaacatcgttggaata 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 taatctaaaataaattcacaagaactttgtggaggaaattctgaaaacatcgttggaata 692
Query: 493 cactcaataaagacaaggaaaacggagaagacacaattaaatttataggttgacttcatg 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 cactcaataaagacaaggaaaacggagaagacacaattaaatttataggttgacttcatg 752
Query: 553 ggctaaccacgaaggtctccttcaatagctcataaattccaagcaatcacagagaaactc 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 ggctaaccacgaaggtctccttcaatagctcataaattccaagcaatcacagagaaactc 812
Query: 613 gcctgtggtaggcgggtgcttgtgggtttagggacagag 651
|||||||||||||||||||||||||||||||||||||||
Sbjct: 813 gcctgtggtaggcgggtgcttgtgggtttagggacagag 851
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space: 667281
Effective search space used: 667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no146_l18.g1 MSMg01no146_l18.g1 CHROMAT_FILE:
MSMg01no146_l18.g1 PHD_FILE: MSMg01no146_l18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:08:52 2005
(568 letters)
>mm_chr8_95631194_95632161
Length = 968
Score = 1052 bits (544), Expect = 0.0
Identities = 562/572 (98%), Gaps = 8/572 (1%)
Strand = Plus / Minus
Query: 1 aaaggaattaa----taccccgaaactttctaaagtagctactcaagaggggctcagggc 56
||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 956 aaaggaattaataatta----gaaactttctaaagtagctactcaagaggggctcagggc 901
Query: 57 cttgactgcccaccaccaaactcagcaatgttgagctctctccagcagacattttagggc 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 cttgactgcccaccaccaaactcagcaatgttgagctctctccagcagacattttagggc 841
Query: 117 cctggttttggcctgtggcgtggtttccaatgctaaaagacacactgaaaccagagcaga 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 cctggttttggcctgtggcgtggtttccaatgctaaaagacacactgaaaccagagcaga 781
Query: 177 tctctgaatgcaaacatgagcaggctcagcacattcccagtgttctgcaactctcttgca 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 tctctgaatgcaaacatgagcaggctcagcacattcccagtgttctgcaactctcttgca 721
Query: 237 gaaggacctcatggggcatcacagaaacatagacagagaaacacaatgttaggacctctt 296
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 720 gaaggacctcatggggcatcacagaaacatagacagagaaacacaatgcgaggacctctt 661
Query: 297 tcccctgtcacctgagtctgagggtgtgtggcctgtgtactctgtccctgagcattcggc 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 tcccctgtcacctgagtctgagggtgtgtggcctgtgtactctgtccctgagcattcggc 601
Query: 357 ttccatatgacactggcctgaaagatctgctgccttgaggaatgttgatcctcctagtgt 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ttccatatgacactggcctgaaagatctgctgccttgaggaatgttgatcctcctagtgt 541
Query: 417 atgaaatacagtcacgtgactgtcttctctctatggcttagctttattaatataagtcca 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 atgaaatacagtcacgtgactgtcttctctctatggcttagctttattaatataagtcca 481
Query: 477 ttagttttgcttgctgatttttttgagaatcataaactcccatatctgttaacaccaccc 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ttagttttgcttgctgatttttttgagaatcataaactcccatatctgttaacaccaccc 421
Query: 537 cctaagcacctttacttcatttggttttcctg 568
||||||||||||||||||||||||||||||||
Sbjct: 420 cctaagcacctttacttcatttggttttcctg 389
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 968
Length adjustment: 10
Effective length of query: 558
Effective length of database: 958
Effective search space: 534564
Effective search space used: 534564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
