CCCTCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATT
TGATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTA
GTCCCCTAGCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGT
GGTCTTTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAG
TTTCATTAGGTCCCATTTGTCAATTCTCGATCTTACAGAGCAAGCCATTG
CTGTTCTGTTCAGGAATTTTTCCCCTGTACCCATATCTTCAAGGCTTTTC
CCCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTC
CTTGATCCACTTAGATTTGACCTTACCACAAGGAGATAAGTATGGATCGA
TTCGCATTCTTCTACATGATAACAACCAGTTGTGCCAGCACCAATTGTTG
AAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGAT
CAAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCC
ATTGGTCTACTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTATCACA
ATTGCCCTGTAGTAAAGCTTTAGGTCAGGCATGGTGATTCCACCAGAGGT
TCTTTTTTTCCTTGAGAAGAGTTTTTG

NNCCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTTAATTCTCAACAGTTA
CAAATCACTTATATATTGGAGAAAATCCTGTTACTTTAGATTACTGACAT
AAATAAATTGCTACTAGGTAGGTGGCAAGTTCTCAATTCACTATAATACA
AATAAGCTTTAAATATGCAGTTATAAATCATTTCATTTTATATAAACATA
TTGAGCCTTAAAATAATTAAAATATTTAAATATACTTACAGCAACTTCTC
ATAAGGATTTTTAATAAAACATAATTACATGAAATAATACTTATGCTACT
AAATAATGTTTAACAGAAATAATGATTACTTCCAAGAATCCTTTTAGTTG
GCTCCTACAAAATTATTAGTAACTAAATTAAGAGTTCATAACGACATAAT
ATGCCACAATTCCATTTGGCCCCAAGTAAGTGAATATGGTCCAAATAGAA
AAATCAAAGAGGTTACATAAACAGGTTACACACACACACACACACACACA
CACACACATATATATATATATATATATATATATATATATATATATATATA
TATACAGATATGCATTTTAGTAAATCATCTTGCCTTGAAGTTAGCTGGAA
TGTTATTGCTCTAATTTTATTCTTGCTTCCATCATGACAAGGTTAAGAGG
AAAAAAAAATCAGTGAAAGGGATTCCAGA

Query= MSMg01no147_h14.g1 MSMg01no147_h14.g1 CHROMAT_FILE:
MSMg01no147_h14.g1 PHD_FILE: MSMg01no147_h14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:04 2005
         (648 letters)



>mm_chr8_62063564_62064611
          Length = 1048

 Score =  891 bits (461), Expect = 0.0
 Identities = 578/649 (89%), Gaps = 53/649 (8%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcttaattctcaacagttacaaatcacttatatattggagaaaatcctgttactttagat 60
           ||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 201 tcttaattcacaacagttacaaatcaattatatattggagaaaatcctattactttagat 260

                                                                       
Query: 61  tactgacataaataaattgctactaggtaggtggcaagttctcaattcactataatacaa 120
           |||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||
Sbjct: 261 tactgacataaataaattactactatgtaggtggcaagttctcaattcactatagtacaa 320

                                                                       
Query: 121 ataagctttaaatatgcagttataaatcatttcattttatataaacatattgagccttaa 180
           |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 321 ataagctttaaatatgcagttacaaatcatttcattttatataaacatattgagccttga 380

                                                                       
Query: 181 aataattaaaatatttaaatatacttacagcaacttctcataaggatttttaataaaaca 240
           |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||
Sbjct: 381 aataattaaaatatttaaatatacttatggcaacttctcataaggatttttaataaaaca 440

                                                                       
Query: 241 taattacatgaaataatacttatgctactaaataatgtttaacagaaataatgattactt 300
           |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 441 taattacatgaaataatacttatgctacaaaataatgtttaacagaaaaaatgattactt 500

                                                                       
Query: 301 ccaagaatccttttagttggctcctacaaaattattagtaactaaatt-aagagttcata 359
           ||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||
Sbjct: 501 ccaagaatccttttagttggctcctacaaaattcttagtaactaaattgaa-agttcata 559

                                                                       
Query: 360 acgacataatatgccacaattccatttggccccaagtaagtgaatatggtccaaatagaa 419
           | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 atggcataatatgccacaattccatttggccccaagtaagtgaatatggtccaaatagaa 619

                                                                       
Query: 420 aaatcaaagaggttacataaacaggttacacacacacacacacacacacacacacacata 479
           |||||||||||||||| |||||||||||||||||||||||||||||||||        ||
Sbjct: 620 aaatcaaagaggttacgtaaacaggttacacacacacacacacacacaca--------ta 671

                                                                       
Query: 480 tatatatatatatatatatatatatatatatatatatatatatacagatatgcattttag 539
           |||||||||                                          |||||||||
Sbjct: 672 tatatatat------------------------------------------gcattttag 689

                                                                       
Query: 540 taaatcatcttgccttgaagttagctggaatgttattgctctaattttattcttgcttcc 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 taaatcatcttgccttgaagttagctggaatgttattgctctaattttattcttgcttcc 749

                                                            
Query: 600 atcatgacaaggttaagaggaaaaaaaaatcagtgaaagggattccaga 648
           |||||||||||||||||||||||||||| ||| ||||||||| ||||||
Sbjct: 750 atcatgacaaggttaagaggaaaaaaaa-tcaatgaaagggactccaga 797


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 77
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space:   662244
Effective search space used:   662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)