Query= MSMg01no148_e22.b1 MSMg01no148_e22.b1 CHROMAT_FILE:
MSMg01no148_e22.b1 PHD_FILE: MSMg01no148_e22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:10 2005
(354 letters)
>mm_chr8_52584635_52585388
Length = 754
Score = 572 bits (296), Expect = e-168
Identities = 311/316 (98%)
Strand = Plus / Minus
Query: 35 ggcttgcttctcacggatgagtctaataaaagcctggagcatctgtccagggatgatgtc 94
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 754 ggcttgcttctcacggatgagtctaataaaagcctggagcacctgtccagggatgatgtc 695
Query: 95 tttgacactgaactatatccttccacatcaatcattaattgagaaaatgccccaccgatt 154
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 tttgacactgaactgtatccttccacatcaatcattaattgagaaaatgccccaccgatt 635
Query: 155 ggcctattggtcaatcagatggactcagctcctcattcaaagttcccctctatacagatg 214
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 634 ggcctattggtcaatcagatggactcaggtcctcattcaaagttcccctctatacagatg 575
Query: 215 gctctaacacatgtctagttgacaaagacaaagaaagaaatcaccaacaacgtaacacat 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 gctctaacacatgtctagttgacaaagacaaagaaagaaatcaccaacaacgtaacacat 515
Query: 275 tcatgatttctccagtcagtattttgggctgagtacagctggacagttccttagcctctg 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 514 tcatgatttctccagtcagtattttgggctgagtacagctggacagttccttagcatctg 455
Query: 335 gggggtggggtggggg 350
|||||| |||||||||
Sbjct: 454 gggggtagggtggggg 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 354
Length of database: 754
Length adjustment: 9
Effective length of query: 345
Effective length of database: 745
Effective search space: 257025
Effective search space used: 257025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no148_e22.g1 MSMg01no148_e22.g1 CHROMAT_FILE:
MSMg01no148_e22.g1 PHD_FILE: MSMg01no148_e22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:10 2005
(668 letters)
>mm_chr8_52455386_52456454
Length = 1069
Score = 1236 bits (639), Expect = 0.0
Identities = 660/667 (98%), Gaps = 1/667 (0%)
Strand = Plus / Plus
Query: 3 tattattatgtgttttgggtatacttaaaactatttgcaaaaatcaagctgccaatttag 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tattattatgtgttttgggtatacttaaaactatttgcaaaaatcaagctgccaatttag 262
Query: 63 tcctgctgagatattaaagttacaattttcttcaatgtacaatttcttcaaaaacactct 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tcctgctgagatattaaagttacaattttcttcaatgtacaatttcttcaaaaacactct 322
Query: 123 agatcctttgtatatataaaaaa-tatttacacatcattgttgctgtagtcatgtgtgaa 181
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 323 agatcctttgtatatataaaaaaatatttacacatcattgttgctgtagtcatgtgtgaa 382
Query: 182 atttatctaattagaagaataatgattccagggtcaagtccaggataatggcaatttcac 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 atttatctaattagaagaataatgattccagggtcaagtccaggataatggcaatttcac 442
Query: 242 agactaactctttaaaagtgctccttttctctcaggccaccttgtagaagacaataatta 301
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 443 agactaactctttaaaagtgctccttttctctcaggccatcttgtagaagacaataatta 502
Query: 302 taattttatacattcagaaaaaaattacttcagatagaaaactttgaacacaggactgta 361
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 503 taattttatacattcagaaaaaaattacttcagatagaaaactttgaagagaggactgta 562
Query: 362 aaaataatctatgccatgatagtatggtcacaaattgcctggttcttgctgaggggtagg 421
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 563 aaaataatctatgccatgataatatggtcacaaattgcctggttcttgctgaggggtagg 622
Query: 422 tagcttgtgctctttatagcccttctgggaaatactcagattcattttattagacggctt 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tagcttgtgctctttatagcccttctgggaaatactcagattcattttattagacggctt 682
Query: 482 cattattcactgtagataaacatcctagataaaatatatttgatctaaaaaagtacacat 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 cattattcactgtagataaacatcctagataaaatatatttgatctaaaaaagtacacat 742
Query: 542 ttatagtattgaggacacataataaaatgtttcacattaataatgcattaataaatgaca 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ttatagtattgaggacacataataaaatgtttcacattaataatgcattaataaatgaca 802
Query: 602 tttaatatattccagtgtatgctatacactgggtaacatgttttacatggatttaactct 661
|||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 803 tttaatatattccactgtatgctatacactgggtaacatgttttacgtggatttaactct 862
Query: 662 catcttt 668
|||||||
Sbjct: 863 catcttt 869
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1069
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1059
Effective search space: 696822
Effective search space used: 696822
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
