NATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCGCGGA
ATTCTAAGAAGAAACATAGTGATCTGAAAAAGAATTAACAGGCATATCCC
TAAATTACTTGTATTCCCCTGTTATTAATATAATTACTTATAAAAGCATG
AAAAAGAAACTTGGATGTAGTTTCTAAAGAAAATTCATTCTATCAATTAA
GGACACTTGAAAGCCAAGGCTAATGAGATGTTGTGAAGTCTGGGGTTGTA
AAGGCCACTTATAGAACACATTTCGTATGGACTTATAACTCTTCAAAGTC
AGGGCTGGCCCTAGCAGCATTCAGAAGCACTTATTCTTTCCCATAAGTCA
GACACTGCTGCCTCTCTGTCAAGGAGAGTACTAAAGGGCATTTTTGTTCC
CCTCTGAATTTGATGGCAAGTTAACACAGATTGACGATAGGGCATCTGAA
AATGCTAGTCTCTTTTATTTTCAATTTCACTGGGTGGAAATTGCCCATAT
TTTGTCTGTTTGGTTCATGTTCAATGGCACGTTGAGTATCTGACAAAATC
TTCCCAATGCTTAAATGTTTAGCAAATAAAGAAAGAATTCACCATTTTTT
TTAAAAAATCATGAAAAATTTTCTAGGAATATATCTCTCAAATCATTGTT
ATAAAACAGTTTAGCAGACCTAGCAATAATCAATTACACCAGGAGCT

NACGATGCTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXCAGAAATTCCTTCTTTATGTCCTCTACCATCATCA
TGAGATATGCTTTTAAATCTAGGTCTACCTTTTCAGGTGTGTTAGGGTGT
CCTGGACTGGGCGAAGTGGGCGTTCTGGGTTCTGATGATGGTGAGTGGTC
CTGGCTTCTGTTAGTAGGATTCTTACGTTTACCTTTCGCCATCTGGCAAT
CTCTGGAGTTAGTTGTTATAGTGTCTTTGTTAAGAGATTGTTCCTCTGTT
GATTTTGTTACCCTCAATCAGCAGGCGTGGGAGACAAGCTCTCTCCTCTG
AGTTTCAGTGGTCAGAGCACTCTCTGCAGGCAAGCTCTCCTCTTTCGGGG
AAGGTGTACAGTTATCTGGCGTTTGGACCTCCTCCTGGCTGAAGGTGAAG
GCCCAAAACAGGATCTTTCGCAGAAGCTGTGTTGCTTTGGCCAGGAAGGT
GGCCGGTTGTCTGGAGTCAAAGATGTCGCCGCCTCAGAAGCTCTGTGGCT
CTCGCCAGGAAGGTGGCTGGTTGTCTGGAGCCGAAGATGGCGCCGCCCCA
GAAGCTCTGTGACTCTCGCCCATACCAGAAACGGCTGGCCTCTGTATTCC
ACACGGTCACCCGTGCAGCCTGCCCTCCGCGGAGTCCCGGAGCCAAGN

Query= MSMg01no149_o16.b1 MSMg01no149_o16.b1 CHROMAT_FILE:
MSMg01no149_o16.b1 PHD_FILE: MSMg01no149_o16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:13:20 2005
         (653 letters)



>mm_chr8_99138583_99139636
          Length = 1054

 Score = 1220 bits (631), Expect = 0.0
 Identities = 646/651 (99%), Gaps = 1/651 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattctaagaagaa-acatagtgatctgaaaaagaattaacaggcatatccctaaatt 62
           |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 ggaattctaagaagaagaaatagtgatctgaaaaagaattaacaggcatatccctaaatt 795

                                                                       
Query: 63  acttgtattcccctgttattaatataattacttataaaagcatgaaaaagaaacttggat 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 acttgtattcccctgttattaatataattacttataaaagcatgaaaaagaaacttggat 735

                                                                       
Query: 123 gtagtttctaaagaaaattcattctatcaattaaggacacttgaaagccaaggctaatga 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 gtagtttctaaagaaaattcattctatcaattaaggacacttgaaagccaaggctaatga 675

                                                                       
Query: 183 gatgttgtgaagtctggggttgtaaaggccacttatagaacacatttcgtatggacttat 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 gatgttgtgaagtctggggttgtaaaggccacttatagaacacatttcgtatggacttat 615

                                                                       
Query: 243 aactcttcaaagtcagggctggccctagcagcattcagaagcacttattctttcccataa 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 aactcttcaaagtcagggctggccctagcagcattcagaagcacttattctttcccataa 555

                                                                       
Query: 303 gtcagacactgctgcctctctgtcaaggagagtactaaagggcatttttgttcccctctg 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gtcagacactgctgcctctctgtcaaggagagtactaaagggcatttttgttcccctctg 495

                                                                       
Query: 363 aatttgatggcaagttaacacagattgacgatagggcatctgaaaatgctagtctctttt 422
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 aatttgatgggaagttaacacagattgacgatagggcatctgaaaatgctagtctctttt 435

                                                                       
Query: 423 attttcaatttcactgggtggaaattgcccatattttgtctgtttggttcatgttcaatg 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 attttcaatttcactgggtggaaattgcccatattttgtctgtttggttcatgttcaatg 375

                                                                       
Query: 483 gcacgttgagtatctgacaaaatcttcccaatgcttaaatgtttagcaaataaagaaaga 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gcacgttgagtatctgacaaaatcttcccaatgcttaaatgtttagcaaataaagaaaga 315

                                                                       
Query: 543 attcaccattttttttaaaaaatcatgaaaaattttctaggaatatatctctcaaatcat 602
           ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 attcaccattttttaaaaaaaatcatgaaaaattttctaggaatatatctctcaaatcat 255

                                                              
Query: 603 tgttataaaacagtttagcagacctagcaataatcaattacaccaggagct 653
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tgttataaaacagtttagcagacctagcaataatcaattacaccaggagct 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1054
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1044
Effective search space:   671292
Effective search space used:   671292
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)