Query= MSMg01no151_a21.b1 MSMg01no151_a21.b1 CHROMAT_FILE:
MSMg01no151_a21.b1 PHD_FILE: MSMg01no151_a21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:46 2005
(106 letters)
>mm_chr8_4497340_4497845
Length = 506
Score = 190 bits (98), Expect = 3e-53
Identities = 104/106 (98%)
Strand = Plus / Plus
Query: 1 tgggatggagctgtggttggagaagacactaatgtgtgcggctgacatgagatgaacatt 60
|||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 201 tgggatggagctgtggttggagaagacactaatgtgtgtggctgacatgagacgaacatt 260
Query: 61 gttacattgaagccagcaatctgtttctggtatctgccctttgtca 106
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttacattgaagccagcaatctgtttctggtatctgccctttgtca 306
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 3
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 106
Length of database: 506
Length adjustment: 8
Effective length of query: 98
Effective length of database: 498
Effective search space: 48804
Effective search space used: 48804
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
| Query= MSMg01no151_a21.g1 MSMg01no151_a21.g1 CHROMAT_FILE:
MSMg01no151_a21.g1 PHD_FILE: MSMg01no151_a21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:46 2005
(442 letters)
>mm_chr8_4633233_4634074
Length = 842
Score = 816 bits (422), Expect = 0.0
Identities = 437/442 (98%)
Strand = Plus / Minus
Query: 1 cacccactccaggccttagggagtatgttcaagcccattgcaggcttctcccacaggtag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 cacccactccaggccttagggagtatgttcaagcccattgcaggcttctcccacaggtag 583
Query: 61 tcagtggttttccaggagcccagacagttcagtacctctgccctgcctgggaagtactct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 tcagtggttttccaggagcccagacagttcagtacctctgccctgcctgggaagtactct 523
Query: 121 aaagctccatgagttagctcatgggcctctagttagtagagctgtgactaggaattgaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 aaagctccatgagttagctcatgggcctctagttagtagagctgtgactaggaattgaac 463
Query: 181 tgagactccagaagagccagcttttctacaaagaaggattgcttgtttgtttttaaagct 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 462 tgagactccagaagagccagcttttctacaaagaaggattgcttgtttgtttttaaagat 403
Query: 241 gtcttctgcacagcctctggagtttcccactccttggctaaaacagtcttccaccacatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 402 gtcttctgcacagcctctggagtttcccactccttggctaaaacagtcttccaccacgtt 343
Query: 301 aggcaccatttgtaaccatgaattattctagccagcctcttccaccccagaataaatgcc 360
||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 342 aggcaccatttgtaaccatgaattattctagccagcctctttgatcccagaataaatgcc 283
Query: 361 cacccaggccataagctttggctcattccctaattatcttacaacttatataacctgttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 cacccaggccataagctttggctcattccctaattatcttacaacttatataacctgttt 223
Query: 421 attctagtctgtgtgacacacg 442
||||||||||||||||||||||
Sbjct: 222 attctagtctgtgtgacacacg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 842
Length adjustment: 9
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
