Query= MSMg01no151_b07.b1 MSMg01no151_b07.b1 CHROMAT_FILE:
MSMg01no151_b07.b1 PHD_FILE: MSMg01no151_b07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:48 2005
(654 letters)
>mm_chr8_30388044_30389097
Length = 1054
Score = 1089 bits (563), Expect = 0.0
Identities = 583/595 (97%), Gaps = 11/595 (1%)
Strand = Plus / Minus
Query: 71 agcacaacagtctaacagaaatatttaggaggaaaacaatgccattggtttcttttatac 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1054 agcacaacagtctaacagaaatatttaggaggaaaacaatgccattggtttcttttatac 995
Query: 131 ctcaaatgagaaactcggaggatcaatttacaaggaaaatcgtttgcctgcgaagtagga 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 994 ctcaaatgagaaactcggaggatcaatttacaaggaaaatcgtttgcctgcgaagtagga 935
Query: 191 agtcttcagatagaaaaccattagatctttttgaagactttagtttctgcaaaaacaatc 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 934 agtcttcagatagaaaaccattagatctttttgaagactttagtttctgcaaaaacaatc 875
Query: 251 aaagaaacaaacaaaacccccaaaccaaccaaccaaccaagcaaacaacaaaattctaac 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 874 aaagaaacaaacaaaacccccaaaccaaccaaccaaccaagcaaacaacaaaattctaac 815
Query: 311 gcacacacacacacacacacacacacacacacaca---ac---accctacaacacacagt 364
|||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 814 acacacacacacacacacacacacacacacacacacacacaagaccctacaacacacagt 755
Query: 365 tcaggtcgtattctgaaaagcaccttcctttgaaaacatttgatgtccagatgtttggaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 tcaggtcgtattctgaaaagcaccttcctttgaaaacatttgatgtccagatgtttggaa 695
Query: 425 taaaatgacctcttctatcctgtacatagcttttctgttttctcttccttgatgtctcaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 taaaatgacctcttctatcctgtacatagcttttctgttttctcttccttgatgtctcaa 635
Query: 485 gcaaaaacagccctcctggttcaaacagactcctgtcacccagctgtgcccagatttgct 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 gcaaaaacagccctcctggttcaaacagactcctgtcacccagctgtgcccagatttgct 575
Query: 545 gtccagtcctaagctgaacagctttga-----atattatattatattatatttgaatatt 599
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 574 gtccagtcctaagctgaacagctttgaatattatattatattatattatatttgaatatt 515
Query: 600 ggaattatgaaataattgtctttgcttaaaaagaatcatcaagctttgaaatgtg 654
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 ggaattatgaaataattgtctttgcttaaaaagaatcatcaagctttgaaatgtg 460
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 59
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space: 672336
Effective search space used: 672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no151_b07.g1 MSMg01no151_b07.g1 CHROMAT_FILE:
MSMg01no151_b07.g1 PHD_FILE: MSMg01no151_b07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:48 2005
(647 letters)
>mm_chr8_29246964_29248009
Length = 1046
Score = 493 bits (255), Expect = e-143
Identities = 304/325 (93%), Gaps = 11/325 (3%)
Strand = Plus / Minus
Query: 1 ctatttatttttacttcttagctaagatttatttcatgtactttattttcatcatatttt 60
||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ctattta-ttttacttcttagttaagatttatttcatgtactttattttcatcatatttt 257
Query: 61 cccttccccaactcccctaagattgtcctcagctctctatccatttaactttgtgctctt 120
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 256 cccttccccaactcctctaagattttcctcagctctctatccatttaactttgtgctctt 197
Query: 121 cctttctttcttttcttttttttctttctttctttctttctttctttctttctttctttc 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 cctttctttcttttc-----tttctttctttctttctttctttctttctttctttctttc 142
Query: 181 tttctttctttctttctttcttcctttctttctttctttcaaaaacccaaaaatatccat 240
|| ||| ||| ||| |||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 141 ttccttccttccttccttt----ctttctttctttctttcaaaaacccaaaattatccat 86
Query: 241 aaccccccaaaaaacctataaaacctcaccaaaaaaaaaaaaaaa-tcaaaacagacagg 299
||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 85 aaccccccaaaaaacctctaaaacctcaccaaaaaaaaaaaaaaaatcaaaacagacagg 26
Query: 300 tgaaaaaccaataggacaacacaaa 324
||||||| |||||||||||||||||
Sbjct: 25 tgaaaaatcaataggacaacacaaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 81
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1046
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1036
Effective search space: 659932
Effective search space used: 659932
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
