Query= MSMg01no151_h13.b1 MSMg01no151_h13.b1 CHROMAT_FILE:
MSMg01no151_h13.b1 PHD_FILE: MSMg01no151_h13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:17 2005
(550 letters)
>mm_chr8_17393475_17394423
Length = 949
Score = 963 bits (498), Expect = 0.0
Identities = 534/550 (97%), Gaps = 9/550 (1%)
Strand = Plus / Minus
Query: 5 gaattcacttcaacctcttttttacaaatttcacgtcaaattttaaatcagatggttgat 64
|||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 749 gaattcacttcaacat-ttttttacaaatttcacatcaaattttaaatcagatggttgat 691
Query: 65 ggtggcaccttctggccaattgtgatattgcatctggatccattgttttgagattggaag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 ggtggcaccttctggccaattgtgatattgcatctggatccattgttttgagattggaag 631
Query: 125 acactcttctgggacctgaagtcctggagattagtcatagtccataaggacctacgccat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 acactcttctgggacctgaagtcctggagattagtcatagtccataaggacctacgccat 571
Query: 185 ggtaggcacatggtagtcttttaagttctgaacaccatacaactcttacttactgttcgt 244
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 570 ggtaggcacatggtagtcttttaagttctgaacaccacacaactcttacttactgttcgt 511
Query: 245 aaatacaagcttcattagggtagagctcatcaacatggccaacttatgaatatccagttt 304
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 510 aaatacaagcttcattagggtagagctcatcaacacggccaacttatgaatatccagttt 451
Query: 305 ctatgctgagttctcagcatatctagccttgagatcatatcttaagacaattaatgctca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ctatgctgagttctcagcatatctagccttgagatcatatcttaagacaattaatgctca 391
Query: 365 tcttac----cacccgttaatcacttggatgtgtatgaagtaccacctcctttttaggag 420
|||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tcttactaatta----ttaatcacttggatgtgtatgaagtaccacctcctttttaggaa 335
Query: 421 atattaagcacctagtatacagcgaatgttcacatagcagggtcagctacaccaaaagta 480
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 atattaagcacctaatatacagcgaatgttcacatagcagggtcagctacaccaaaagta 275
Query: 481 tgtgagcatttataatgactctttactaattgtctgctctatttggtatgtgacaattat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tgtgagcatttataatgactctttactaattgtctgctctatttggtatgtgacaattat 215
Query: 541 gttcctataa 550
||||||||||
Sbjct: 214 gttcctataa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 949
Length adjustment: 10
Effective length of query: 540
Effective length of database: 939
Effective search space: 507060
Effective search space used: 507060
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no151_h13.g1 MSMg01no151_h13.g1 CHROMAT_FILE:
MSMg01no151_h13.g1 PHD_FILE: MSMg01no151_h13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:17 2005
(616 letters)
>mm_chr8_17263448_17264463
Length = 1016
Score = 1065 bits (551), Expect = 0.0
Identities = 599/619 (96%), Gaps = 8/619 (1%)
Strand = Plus / Plus
Query: 1 ataattattggatatatatctgttattgaaaaattttccacatttttgtcagaaacagaa 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataattattggatatatatctgctattgaaaaattttccacatttttgtcagaaacagaa 260
Query: 61 atggattgcagtcccaaaataaggataaatttttagtgataaggctatatttcagttatt 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 atggattgcagtcccaaaataaggatacatttttagtgataaggctatatttcagttatt 320
Query: 121 tcagattttcacgaatttaaaaaattaattaaaataagtggtgtcgatatgcacaagacc 180
|||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 321 tcagattttcacaaatttaaaaaa-taattaaaataagtggtgttgatatgcacaagacc 379
Query: 181 tctgcaagctcaagacaggcaaattcccttccccaaaggggaggtgggctcaaagtcctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tctgcaagctcaagacaggcaaattcccttccccaaaggggaggtgggctcaaagtcctg 439
Query: 241 ccccaatctgaggggccaatgataattggtaactgcagagatagagagagtgagccagtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ccccaatctgaggggccaatgataattggtaactgcagagatagagagagtgagccagtt 499
Query: 301 ttccttaagtgtgtggcccctggtcaattggctcaggtcgaacacaaagccacagtccca 360
||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||
Sbjct: 500 ttccttaagtgtgtggcccctggtcaattggctgaggtcgaatagaaagccacagtccca 559
Query: 361 aaagtacatgggcaacattaagtggacttggtggtccacaagtaaggtaggtaaggaaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aaagtacatgggcaacattaagtggacttggtggtccacaagtaaggtaggtaaggaaag 619
Query: 421 agtagacagatctgagaggagctaagggtgcaggtgaataagatcaaaatatgttacatg 480
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 620 agtagacagatctgagaggagctaagggtgcaggtgagtaagatcaaaatatgttacatg 679
Query: 481 aaattctcaaagaactaatataaaggaaaagaataaagtgatagagaagacaatgaacaa 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 680 aaattctcaaagaactaatataaaggaaaagaataaagtgatagagaagacaatgaacta 739
Query: 541 cctaacatctcccctatcaacttanaagatgtggggtanaaagtaaagtga----cttta 596
|||||||||||||||| ||||||| ||||||||||||| |||||||| | |||||
Sbjct: 740 cctaacatctcccctaccaacttaaaagatgtggggtaaaaagtaaa---aaaaacttta 796
Query: 597 ccaaagctcaagcagtgca 615
|||||||||||||||||||
Sbjct: 797 ccaaagctcaagcagtgca 815
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space: 609636
Effective search space used: 609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
