Query= MSMg01no153_e08.b1 MSMg01no153_e08.b1 CHROMAT_FILE:
MSMg01no153_e08.b1 PHD_FILE: MSMg01no153_e08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:36 2005
(174 letters)
>mm_chr8_14017331_14017904
Length = 574
Score = 313 bits (162), Expect = 3e-90
Identities = 171/174 (98%)
Strand = Plus / Plus
Query: 1 caatgcgcaacagcacagaactgcccaagctttgccttcagtgaagagaggtgttgctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caatgcgcaacagcacagaactgcccaagctttgccttcagtgaagagaggtgttgctgg 260
Query: 61 ctcccaacaaggcatcgttgacacaagctggatcaagggtcagagacccaagccctggcc 120
|||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 ctcccaacaaggcatcgtcgacacaagctgggtcaagggtcagagacccaagccctggcc 320
Query: 121 ttgagaaggacctgagaaagggagtggggaaggaaggtggaagggagggaggga 174
|||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 ttgagaaggacctgagaaagggagtggggaaggagggtggaagggagggaggga 374
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 174
Length of database: 574
Length adjustment: 8
Effective length of query: 166
Effective length of database: 566
Effective search space: 93956
Effective search space used: 93956
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no153_e08.g1 MSMg01no153_e08.g1 CHROMAT_FILE:
MSMg01no153_e08.g1 PHD_FILE: MSMg01no153_e08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:36 2005
(636 letters)
>mm_chr8_14176398_14177433
Length = 1036
Score = 656 bits (339), Expect = 0.0
Identities = 356/363 (98%), Gaps = 3/363 (0%)
Strand = Plus / Minus
Query: 274 tccagcctagatatcagggcttgcacctagtcttactatctcttgttgctgtgtttggtt 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1036 tccagcctagatatcagggcttgcacctagtcttactatctcttgttgctgtgtttggtt 977
Query: 334 gatatccctgggggacctgctcttttctgaaaggacacagaggaagactggatctggggt 393
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 976 gatatccctgggggatctgctcttttctgaaaggacacagaggaagactggatctggggt 917
Query: 394 caaggggaagtcggaggagtgaagtaactatagtcaggatgcaatgtatgagagaagaat 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 916 caaggggaagtcggaggagtgaagtaactatagtcaggatgcaatgtatgagagaagaat 857
Query: 454 ttttaaaaagaaaatttttctttttttttttaagtcattactgacttaatttatctatgc 513
|||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 856 ttttaaaaagaaaatttttc---ttttttttaagtcgttactgacttaatttatctatgc 800
Query: 514 atttaagtagcatttctaataagatacatttttggaatagtcgtgctcaaaatacatatg 573
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 799 atttaagtagcatttctactaagatacatttttagaatagtcgtgctcaaaatacatatg 740
Query: 574 tatgtaaattcaatgtattgaaagctaataataaactggccacaattcatatgaatattt 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 tatgtaaattcaatgtattgaaagctaataataaactggccacaattcatatgaatattt 680
Query: 634 ttc 636
|||
Sbjct: 679 ttc 677
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space: 642276
Effective search space used: 642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
