Query= MSMg01no154_k20.b1 MSMg01no154_k20.b1 CHROMAT_FILE:
MSMg01no154_k20.b1 PHD_FILE: MSMg01no154_k20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:22 2005
(531 letters)
>mm_chr8_87157307_87158237
Length = 931
Score = 1011 bits (523), Expect = 0.0
Identities = 526/527 (99%)
Strand = Plus / Minus
Query: 5 ggaattcctctttcctcaccctcctgggtgtgtgagacgcctcatgctgctgaagcaggc 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 ggaattcctctttcctcagcctcctgggtgtgtgagacgcctcatgctgctgaagcaggc 672
Query: 65 attcccaaaggcatctctcaccagagctggacccaccccttccgagcccactccgcccct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 attcccaaaggcatctctcaccagagctggacccaccccttccgagcccactccgcccct 612
Query: 125 ttgtgctctcaaatagggcagacagaagccatttggcactgactaccatgtgcctcaagg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ttgtgctctcaaatagggcagacagaagccatttggcactgactaccatgtgcctcaagg 552
Query: 185 tgctccatctctctctggcttttgtcagagagcggttaggaggaccaggctctgaaggag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 tgctccatctctctctggcttttgtcagagagcggttaggaggaccaggctctgaaggag 492
Query: 245 tcaggaaagggtggtctccaccctaacccacccacgaagctacagatggtcccacccagg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tcaggaaagggtggtctccaccctaacccacccacgaagctacagatggtcccacccagg 432
Query: 305 ctggggtccccaagggagaggtataagatcctcagtaacttgtgtggggcagcccagaat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ctggggtccccaagggagaggtataagatcctcagtaacttgtgtggggcagcccagaat 372
Query: 365 cctgcaagctctcacctggttctctgctgggaggcggggcatggaggcggccctggtctg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 cctgcaagctctcacctggttctctgctgggaggcggggcatggaggcggccctggtctg 312
Query: 425 gccttccatggggaggtagtgttcgctgtctgagtagccatcagtacccatttctcgcat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gccttccatggggaggtagtgttcgctgtctgagtagccatcagtacccatttctcgcat 252
Query: 485 ctccacagactgtcaggcagagggtggggtagggtgagtctggagcc 531
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ctccacagactgtcaggcagagggtggggtagggtgagtctggagcc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 931
Length adjustment: 10
Effective length of query: 521
Effective length of database: 921
Effective search space: 479841
Effective search space used: 479841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no154_k20.g1 MSMg01no154_k20.g1 CHROMAT_FILE:
MSMg01no154_k20.g1 PHD_FILE: MSMg01no154_k20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:22 2005
(441 letters)
>mm_chr8_87015454_87016295
Length = 842
Score = 839 bits (434), Expect = 0.0
Identities = 440/442 (99%), Gaps = 1/442 (0%)
Strand = Plus / Plus
Query: 1 cagcctgatctac-cagcattgagttctagcccaaggccacacacgacatacacagtagg 59
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagcctgatctacacagcattgagttctagcccaaggccacacacgacatacacagtagg 260
Query: 60 ctgtgtcctaaaaataaaggctcacttgtgcgatggcggacccaagatgtcacttcacaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgtgtcctaaaaataaaggctcacttgtgcgatggcggacccaagatgtcacttcacaa 320
Query: 120 gtatgagtctctacaccagccactctcctagtactctccacccaacctttctgtctcctg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtatgagtctctacaccagccactctcctagtactctccacccaacctttctgtctcctg 380
Query: 180 atacctagaaggtacaggcggagagcatgtgcggcttagggaagtgtctgcttcagtgca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atacctagaaggtacaggcggagagcatgtgcggcttagggaagtgtctgcttcagtgca 440
Query: 240 gttattccacgcacatagaagagcttgctgcgactcatccctcctaggcaagaccagcac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gttattccacgcacatagaagagcttgctgcgactcatccctcctaggcaagaccagcac 500
Query: 300 ctctatcctaattgccaacgcactcctgagaactcacttttaggagcagggctgggaact 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctctatcctaattgccaacgcactcctgagaactcacttttaggagcagggctgggaact 560
Query: 360 gggcgtcttctttcatctcctgctgctgagtgttcaggacagtcagggaacggatggcca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gggcgtcttctttcatctcctgctgctgagtgttcaggacagtcagggaacggatggcca 620
Query: 420 cagctggtaaggaagcttggac 441
||||||| ||||||||||||||
Sbjct: 621 cagctgggaaggaagcttggac 642
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 842
Length adjustment: 9
Effective length of query: 432
Effective length of database: 833
Effective search space: 359856
Effective search space used: 359856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
